Gadus morhua (Atlantic cod): 115552077
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Entry
115552077 CDS
T10832
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04137
Mitophagy - animal
gmh04140
Autophagy - animal
gmh04217
Necroptosis
gmh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115552077 (sqstm1)
04137 Mitophagy - animal
115552077 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
115552077 (sqstm1)
04218 Cellular senescence
115552077 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115552077 (sqstm1)
03029 Mitochondrial biogenesis [BR:
gmh03029
]
115552077 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115552077 (sqstm1)
Membrane trafficking [BR:
gmh04131
]
Autophagy
Mitophagy
Cargo receptors
115552077 (sqstm1)
Pexophagy
115552077 (sqstm1)
Aggrephagy
115552077 (sqstm1)
Xenophagy
115552077 (sqstm1)
ER-phagy
ER-phagy recepters
115552077 (sqstm1)
Other autophagy associated proteins
Midbophagy
115552077 (sqstm1)
Mitochondrial biogenesis [BR:
gmh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
115552077 (sqstm1)
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115552077 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
115552077
NCBI-ProteinID:
XP_030223690
Ensembl:
ENSGMOG00000027992
LinkDB
All DBs
Position
10:complement(11129465..11134399)
Genome browser
AA seq
446 aa
AA seq
DB search
MSVTIKAYLLGKDDVHKEIRRFAVDKEDSTSFNYLSKKVVDVFSNLRNIGFQMYYRDEDS
DMIAFSSDDELRMALTVLQDNTFRLFIKEKKEHRRDFPLHAFPGGIPTFTFPPPPGPGMP
HAPPPPHPCTPPPHPGPPPVHPNVTCDGCEGPVAGTRFKCTVCPDYDLCSTCQAKGLHRE
HPLLPIWHPLANLMEWFPRGKWMRKMRHCMWNGAQPPTKPGPTGFTCGTQSTAAPGTSTS
PPSSDTSSSSGYSQANAEFLKNIGEGVAAMLSPLGIDVDIDVEHDGLRTKVTSPETPAQS
GAPAPPMAQADGATMGPEGAGSGSAEVDIDKPNSLGGIHSDQGTKETEEEEWTHLTPKEV
DPSTGELQSLIGTPSEGQEGPSGLREAALYPHLPEEADPRLVESLSQMLSMGFSDEGGWL
THLLQTKACDIGAALDTIHYSKPPKK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgacaataaaagcctatctactgggcaaagacgacgtccataaagagatccgt
cgctttgctgttgataaagaggattctaccagttttaattatctgagtaagaaggtcgta
gacgtcttctccaatctccgcaacatcggcttccagatgtactatcgagatgaagacagc
gacatgatcgccttctcctcagacgatgagctgagaatggcgctcaccgtcctgcaggac
aacaccttccgcctgttcattaaagagaagaaggagcacaggcgtgacttcccgctccac
gccttccccggtggaatcccaaccttcacctttccccctcctcccggcccaggcatgcct
catgccccgccccctcctcacccttgcacgccccctcctcaccctggcccgccccccgtg
catcccaacgtcacatgcgacggctgcgagggccctgtggccggcacacgcttcaagtgc
acggtgtgtcctgactacgacctgtgctccacctgccaggccaaggggctgcaccgcgaa
caccccctcctgcccatctggcacccccttgccaacctgatggagtggtttcctaggggc
aagtggatgaggaagatgagacattgcatgtggaacggagctcagcccccgaccaagccg
gggcccactgggttcacctgtgggacccagtccaccgccgcccctggtacttcgaccagc
ccgccatcctccgacacctccagctcatctggatattctcaagccaacgctgaattcctg
aagaacattggcgagggagtggcggccatgttgagcccactaggcatcgacgtggacatc
gacgtggagcacgacggcctcaggaccaaggtgacctccccagaaaccccagcccagtcg
ggggcccctgcacctcccatggcccaagctgatggagccacaatgggtccagagggagca
gggtccgggagtgctgaggtggatatcgacaagccaaacagtctcggaggcattcactct
gaccaaggcaccaaggagaccgaagaggaagagtggacccacttgactccaaaggaagtg
gatccatccactggtgagctgcagtccctgataggcaccccctctgagggccaggagggc
ccatcagggctgcgtgaggctgccctctacccacacctcccagaagaggcagaccccaga
ctggtggagtccctgtcccagatgctatccatgggcttcagcgacgagggaggctggctg
acccacctcctgcagaccaaggcctgtgacatcggagccgcgctggacaccatccactac
tccaagccccccaagaagtag
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integrated database retrieval system