KEGG   Gadus morhua (Atlantic cod): 115552077
Entry
115552077         CDS       T10832                                 
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
  KO
K14381  sequestosome 1
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh04137  Mitophagy - animal
gmh04140  Autophagy - animal
gmh04217  Necroptosis
gmh04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115552077 (sqstm1)
   04137 Mitophagy - animal
    115552077 (sqstm1)
  09143 Cell growth and death
   04217 Necroptosis
    115552077 (sqstm1)
   04218 Cellular senescence
    115552077 (sqstm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmh04131]
    115552077 (sqstm1)
   03029 Mitochondrial biogenesis [BR:gmh03029]
    115552077 (sqstm1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmh04147]
    115552077 (sqstm1)
Membrane trafficking [BR:gmh04131]
 Autophagy
  Mitophagy
   Cargo receptors
    115552077 (sqstm1)
  Pexophagy
    115552077 (sqstm1)
  Aggrephagy
    115552077 (sqstm1)
  Xenophagy
    115552077 (sqstm1)
  ER-phagy
   ER-phagy recepters
    115552077 (sqstm1)
  Other autophagy associated proteins
   Midbophagy
    115552077 (sqstm1)
Mitochondrial biogenesis [BR:gmh03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    115552077 (sqstm1)
Exosome [BR:gmh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115552077 (sqstm1)
SSDB
Motif
Pfam: UBA_5 ZZ PB1
Other DBs
NCBI-GeneID: 115552077
NCBI-ProteinID: XP_030223690
Ensembl: ENSGMOG00000027992
LinkDB
Position
10:complement(11129465..11134399)
AA seq 446 aa
MSVTIKAYLLGKDDVHKEIRRFAVDKEDSTSFNYLSKKVVDVFSNLRNIGFQMYYRDEDS
DMIAFSSDDELRMALTVLQDNTFRLFIKEKKEHRRDFPLHAFPGGIPTFTFPPPPGPGMP
HAPPPPHPCTPPPHPGPPPVHPNVTCDGCEGPVAGTRFKCTVCPDYDLCSTCQAKGLHRE
HPLLPIWHPLANLMEWFPRGKWMRKMRHCMWNGAQPPTKPGPTGFTCGTQSTAAPGTSTS
PPSSDTSSSSGYSQANAEFLKNIGEGVAAMLSPLGIDVDIDVEHDGLRTKVTSPETPAQS
GAPAPPMAQADGATMGPEGAGSGSAEVDIDKPNSLGGIHSDQGTKETEEEEWTHLTPKEV
DPSTGELQSLIGTPSEGQEGPSGLREAALYPHLPEEADPRLVESLSQMLSMGFSDEGGWL
THLLQTKACDIGAALDTIHYSKPPKK
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgtcagtgacaataaaagcctatctactgggcaaagacgacgtccataaagagatccgt
cgctttgctgttgataaagaggattctaccagttttaattatctgagtaagaaggtcgta
gacgtcttctccaatctccgcaacatcggcttccagatgtactatcgagatgaagacagc
gacatgatcgccttctcctcagacgatgagctgagaatggcgctcaccgtcctgcaggac
aacaccttccgcctgttcattaaagagaagaaggagcacaggcgtgacttcccgctccac
gccttccccggtggaatcccaaccttcacctttccccctcctcccggcccaggcatgcct
catgccccgccccctcctcacccttgcacgccccctcctcaccctggcccgccccccgtg
catcccaacgtcacatgcgacggctgcgagggccctgtggccggcacacgcttcaagtgc
acggtgtgtcctgactacgacctgtgctccacctgccaggccaaggggctgcaccgcgaa
caccccctcctgcccatctggcacccccttgccaacctgatggagtggtttcctaggggc
aagtggatgaggaagatgagacattgcatgtggaacggagctcagcccccgaccaagccg
gggcccactgggttcacctgtgggacccagtccaccgccgcccctggtacttcgaccagc
ccgccatcctccgacacctccagctcatctggatattctcaagccaacgctgaattcctg
aagaacattggcgagggagtggcggccatgttgagcccactaggcatcgacgtggacatc
gacgtggagcacgacggcctcaggaccaaggtgacctccccagaaaccccagcccagtcg
ggggcccctgcacctcccatggcccaagctgatggagccacaatgggtccagagggagca
gggtccgggagtgctgaggtggatatcgacaagccaaacagtctcggaggcattcactct
gaccaaggcaccaaggagaccgaagaggaagagtggacccacttgactccaaaggaagtg
gatccatccactggtgagctgcagtccctgataggcaccccctctgagggccaggagggc
ccatcagggctgcgtgaggctgccctctacccacacctcccagaagaggcagaccccaga
ctggtggagtccctgtcccagatgctatccatgggcttcagcgacgagggaggctggctg
acccacctcctgcagaccaaggcctgtgacatcggagccgcgctggacaccatccactac
tccaagccccccaagaagtag

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