Gadus morhua (Atlantic cod): 115553842
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Entry
115553842 CDS
T10832
Name
(RefSeq) toll-like receptor 2 type-1
KO
K10159
toll-like receptor 2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04145
Phagocytosis
gmh04620
Toll-like receptor signaling pathway
gmh05132
Salmonella infection
gmh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
115553842
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115553842
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115553842
09171 Infectious disease: bacterial
05132 Salmonella infection
115553842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115553842
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115553842
04054 Pattern recognition receptors [BR:
gmh04054
]
115553842
04090 CD molecules [BR:
gmh04090
]
115553842
00536 Glycosaminoglycan binding proteins [BR:
gmh00536
]
115553842
Membrane trafficking [BR:
gmh04131
]
Endocytosis
Phagocytosis
Toll-like receptors
115553842
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of breast milk
115553842
Pattern recognition receptors [BR:
gmh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
115553842
CD molecules [BR:
gmh04090
]
Proteins
115553842
Glycosaminoglycan binding proteins [BR:
gmh00536
]
Hyaluronan
Cell surface receptors
115553842
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
S_100
TIR_2
EF-hand_7
EF-hand_1
LRR_Zer-1
LRR_5
LRR_9
LRR_NXF1-5
EF-hand_8
EF-hand_5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
115553842
NCBI-ProteinID:
XP_030226229
LinkDB
All DBs
Position
11:complement(11921398..11935118)
Genome browser
AA seq
976 aa
AA seq
DB search
MFWTLLSRSVLICGLVTSHSLTTPTVPTTISKEGPCRIYNSGRCADCLGRQLDRIPWRQF
PSTLEKVDLSYNKLQAVYAEDFQNLPHLQVLQLQFNNLSHIDEDAFKHNPILESLNIFNN
SLREIPASALISLMNLKKLDMSNNLYKRATLVEGFSKLVKLKVLSMGGPLVMGLKKGDFQ
PLKNIKLQGFAIKCTSNLSFYELGSLEVIQTQQMGFDMAIDQRPQALPLMLSDIANKTFT
AIQFRNLFQFMYFSGKEDIFFNLRYVKAYQLIFHRGKFNENLLRMALMNIQEANIVKRLR
LQYIDFARSPTFEDSGAGSSITNLKLDGLDLWSISNPDVLRFDWRFTWFNKVKQLSLQYV
YFTSVPCDAWAEMGSVETLDVSNNRLQDSVLYNKRCDLTGSEPHVRIFNVSTNSLVSLKE
MSYLTQEFKRLEVLDLSHNMLGSLEGSRDCVWKPNITRLIAHHNQFVSEALQCLPTTMQF
LDLSNCGLGQLDMTFFDQTTQLTELLLSGNKIKFIPPHWRSAYLRSLTLDSNSFGVISVE
SFREMPLLSQLSAGNNPYHCTCELHAFIQQTQSQGKVTLTEWPENYKCYHPEPFLNTIIA
NYLPAHVACDIRLVVVISVAVTAAVLMILMLICYIFNIPWYAKATYQIVRAKYRAHKERA
AGEGEVFVYHAFISYCHSDGDWVRDQLLPCLENNRDPYRLCIHERDFMPGKWIIDNIIDN
IENSRKVIFVLSRHFVNSEWCNYELYFAQQRAMGKAFSDVILVVMEPIDPHSLPSKYCKL
KKMLSTKTYLEWPQQPKHQPFFWAQLKSVLGKPSLTRGRAGSTRSRAASEGRVSMIEPPM
EVDQQDHGVNKAELHGEEIETKELFLKPIPIAVTDNAIYTMTSQLESAMEGLIKVFHSYS
SKEGDKYKLSKAEMKSLLQGELSEFLAGSSDPLVVEKIMRDLDENQDGEVDFQEFVVLVA
ALTVACNEFFIQSQLK
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgttttggacattgctgagccgaagtgttctaatctgtggattggtaacatctcattcc
ctgaccacgcccacggtccccacgaccatctccaaagaaggaccttgtcgtatttacaac
tctggccgttgtgcagactgcctgggaagacagctcgaccgcattccctggagacaattt
ccctccacactggagaaggtggatctctcctacaacaaacttcaggctgtctatgctgaa
gacttccagaatctcccccatcttcaggtccttcagttgcagttcaataacctttcccac
attgatgaagacgccttcaagcacaaccccatcctggagtctctaaatatattcaacaac
tccctgcgtgagatccctgcctcagctctgatttcgcttatgaatctcaaaaaactcgac
atgtctaataacctctacaaacgtgccaccttagtggaaggcttctccaaactggtcaaa
ctcaaagtcctttccatgggcggacccctggtcatgggactcaaaaagggggactttcag
ccattgaaaaacattaaattacaaggctttgctatcaagtgcacttccaatttgagcttc
tatgaacttggtagtttagaggtgatccagacacagcagatgggatttgatatggcaatt
gaccaaagacctcaggctctccctttaatgctgagtgatattgcaaacaagaccttcact
gccattcagttccgcaacctatttcagttcatgtacttctcggggaaggaagacatcttc
ttcaatttaaggtacgttaaggcctaccagctcatctttcatcgtggaaagttcaacgag
aatcttctacggatggccttaatgaacatacaggaggccaacattgttaagagactgagg
cttcagtacatcgactttgctcgttcacctacgtttgaagacagcggtgctggatccagc
ataacaaaccttaaattggatggattggatctgtggtccatcagtaatcctgatgtgctg
cgatttgactggcgcttcacttggttcaacaaggtaaagcagctgtccctccagtatgtg
tacttcacctcggtgccgtgtgatgcctgggcagagatggggagtgtggagacgctggac
gtttccaacaaccgtctgcaggactctgtgctctacaacaagaggtgcgacctcacgggt
agtgagccccatgttcgcatcttcaacgtgagcaccaacagccttgtcagcctgaaggaa
atgtcatacttgactcaggagtttaagcgactagaggttcttgatctgagccacaacatg
ctgggttccttggagggaagcagggattgcgtgtggaagccaaacatcaccagactgatc
gctcaccacaaccagtttgtgagtgaggccctgcagtgtctgcccaccaccatgcagttc
ctggacctgtccaactgcggcctgggccagctggacatgaccttcttcgaccaaaccacc
cagctcactgaactgctactcagtggcaataaaatcaagttcatccctccgcactggcgg
agcgcctacctgcggtcacttactctggacagcaactcgtttggggtcatcagcgtggaa
tccttccgggagatgcctctactgtctcaactcagtgccggcaataacccctaccattgc
acatgcgagctccatgccttcatccagcagacccagtctcaggggaaagtgaccctcacg
gagtggcctgagaactacaagtgttatcacccggagcccttcctgaacactatcatagcc
aattacctccctgcacacgtggcctgtgacatacggctggtggtggtcatctcggttgcc
gtgacggccgccgtgttgatgatactgatgctgatttgctacattttcaatattccatgg
tatgcaaaggccacctaccaaattgtcagggcgaaatacagagcccacaaggagagggcg
gccggggagggggaggtctttgtgtaccacgccttcatatcctactgtcactcagacgga
gactgggtcagggatcagctcctgccctgcctggagaacaacagggacccgtaccgtctg
tgtattcacgagagggacttcatgcctggaaagtggatcatcgacaacatcatcgacaac
attgaaaacagccgaaaggtgatttttgtactctcccggcactttgtgaacagtgagtgg
tgcaactacgagctctacttcgcccagcagagagccatgggcaaggcgttcagcgacgtc
atcctggtggtgatggagcccatcgacccccactccctgcccagcaagtactgcaagctg
aagaagatgctgagcaccaaaacctacctggagtggccgcagcagcctaagcaccagccc
ttcttctgggcacagctgaagagcgtgctgggcaagccatctctgaccagaggcagagct
ggcagtacaaggagcagggcggcctcagagggtagggtgtccatgatagagccccccatg
gaggtggaccagcaagatcacggggtaaataaagcagagctccacggagaggaaattgag
actaaagaactattcctcaagcccatcccgatagcagtcacagacaacgctatctacacg
atgacttcccaactggagagcgccatggaaggcctgatcaaagtgttccactcctactcg
tccaaggagggagacaagtacaaactgagcaaagctgagatgaagagccttctccagggg
gaactctctgagtttttggctggaagtagcgatccgttggtggtggagaagatcatgcgg
gacctggatgagaaccaggacggggaggtggacttccaggagtttgtggttctagtagcg
gcgctgaccgtagcctgcaatgagttcttcatacagagccaactgaagtaa
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