Gadus morhua (Atlantic cod): 115554105
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Entry
115554105 CDS
T10832
Name
(RefSeq) beta-1,4-galactosyltransferase 3-like
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00510
N-Glycan biosynthesis
gmh00513
Various types of N-glycan biosynthesis
gmh00514
Other types of O-glycan biosynthesis
gmh00515
Mannose type O-glycan biosynthesis
gmh00533
Glycosaminoglycan biosynthesis - keratan sulfate
gmh00601
Glycosphingolipid biosynthesis - lacto and neolacto series
gmh01100
Metabolic pathways
Module
gmh_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
115554105
00513 Various types of N-glycan biosynthesis
115554105
00515 Mannose type O-glycan biosynthesis
115554105
00514 Other types of O-glycan biosynthesis
115554105
00533 Glycosaminoglycan biosynthesis - keratan sulfate
115554105
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
115554105
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gmh01003
]
115554105
Enzymes [BR:
gmh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
115554105
2.4.1.90 N-acetyllactosamine synthase
115554105
Glycosyltransferases [BR:
gmh01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
115554105
Glycolipid
115554105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
115554105
NCBI-ProteinID:
XP_030226579
Ensembl:
ENSGMOG00000035070
LinkDB
All DBs
Position
11:24461947..24476590
Genome browser
AA seq
372 aa
AA seq
DB search
MVSFQSKWRYLFMFLGVQLVVMALLSREGYQRRVTYFMRIFRKSDGVGRNLSATGSDVYA
NLTILARAPSSSDVMTYCPQTSPFIRGPIHVSFPSGLTLAQVQRKNPLVVRGGRYRPPGC
ESRHSTAIIIPHRNREHHLKFLLYYLHPFLQRQQLNYGIYIIHQAGNYTFNRAKLMNVGF
REAMREENWDCLFFHDVDLIPEDDRNTYICDANPKHAAIAMDKFGYKLPYNLYFGGVSAL
TPLHYLKMNGFPNNYWGWGGEDDDIGVRVSLGGMHITRPSVRVGRYKMIKHKLDKGNDIN
PKRFNMLAKTRQSWKLDGMNTAEYEIVRRQHHPLYTNITVDIGTEEGLHKTPAAAKPEPV
DPAKPNQEPGKS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcttccagtccaagtggcgatacctgttcatgttcctgggcgtgcagctggtc
gtcatggcgctgctgtcccgcgagggctaccagagacgggtcacctacttcatgcgcata
ttccgcaaaagcgacggtgtcggccgtaacctgtcggccacgggcagcgacgtctacgcc
aacctgaccatcctggccagggccccgtccagcagtgacgtcatgacctactgcccccag
acctcgcccttcatacgtgggcccatccatgtaagcttcccttcgggcctgactctggcg
caggtgcagcggaagaaccccctggtggtgaggggggggcggtaccggccgcccggctgt
gagtccaggcacagcacggccatcatcatcccccacaggaaccgcgaacaccacctcaag
ttcctcctctactacctgcaccccttcctccagcggcagcagctcaactatgggatctac
atcatacaccaggccgggaactacacgtttaatcgagccaagctaatgaacgtgggcttc
cgggaggcgatgcgagaggaaaactgggactgcctgtttttccacgatgtggacctgatc
ccagaagacgaccgcaacacgtacatctgtgacgccaacccaaagcacgctgctatcgcc
atggacaagtttggctacaagcttccttacaatctgtacttcggaggcgtgtctgctctg
actccgctgcactacctcaagatgaacggcttccccaacaactactggggctgggggggg
gaggacgacgacatcggagtcagggtttctctcggtgggatgcacatcacgcgtccgtcc
gtgagagtcggccgctacaagatgatcaaacacaagctggacaaaggcaacgacatcaat
cctaaacgattcaacatgctggccaaaacccgccagtcgtggaagctggacgggatgaac
actgcagagtatgagatcgtacggcgccagcaccatcccctctacaccaacatcacggtg
gacatcggcacagaggaaggcctccacaaaaccccagcagctgccaagccagaacccgtc
gacccagccaaacccaaccaggagccagggaagagctag
DBGET
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