Gadus morhua (Atlantic cod): 115555214
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Entry
115555214 CDS
T10832
Symbol
ptprc
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04514
Cell adhesion molecules
gmh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115555214 (ptprc)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115555214 (ptprc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmh01009
]
115555214 (ptprc)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gmh04090
]
115555214 (ptprc)
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115555214 (ptprc)
Protein phosphatases and associated proteins [BR:
gmh01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115555214 (ptprc)
CD molecules [BR:
gmh04090
]
Proteins
115555214 (ptprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
PTP-SAK
Tc-R-P
DSPc
Y_phosphatase3
PTP-NADK
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
115555214
NCBI-ProteinID:
XP_030227773
Ensembl:
ENSGMOG00000018523
LinkDB
All DBs
Position
12:complement(11426777..11451475)
Genome browser
AA seq
1345 aa
AA seq
DB search
MAGLDGLRVLLLLAGLVAMANCQVNPNGQVTPTVKPTTPTGQVNPTVVVVLATPTGQVNP
TDQSTTVSPSRTAVPTSSTAVPTSSNATSPSSNATSPSSTAVLPTSTAVLPASTASSPSS
NASSPSTNSSSPSTNSSSPSTNASSPSTNSSSPASTASSPLKTSTPNPSSLPQTAATQTS
VPTATTGPPPPLCNYSGEAYKTGFLLTFENVTEGNYSIELTKRSTNESNKVTVALSGTNQ
THLLQYLKPSTNYTVHISPSKHLTVTCGRNLELKTNGINQDEIVELPTDSYQDICYETEW
NIWNTVFNVSSKKYKFCIKPKYTDLCTNLTTPLNSYPPLNFTKWISLEYLNPDNIKLEVP
NKLPAEINWKNQMDLKCEGLGINFTCEGPDKKKYKLDKLEPYTKYTCTGVLYNLHNKTIA
IEKRVTKEVNITCDLELKVTDTPSKESVKFKWNASSKHCPNLSQHNDLSYNCSCVGKDKA
RYTPSSKERSCEVTGLLPYTKYNCKIQPRFNDKPIGRPHGEGHICTSAGVPKNVTIKRTT
QVENNAFQVECTDLIEGDWRGPKGSYHATITPGVHKKMQNRSCFFQFGDLSYSTGYTVSI
VAFNGVNSGKALIVKLQTSYNDRVLIGFLVFLILLTALALSFVLYKIYILQRKKTHQDDG
LLLTPQTNEEDQLMHLEPIGAEVLLDVYKKKIADEGRLFLAEFQSVPRIFSRNTMKEAKR
SYNAVKNRYVDILPYDYNRVQLTSGNGEHGCDYINASFINGFQEPKKYIAAQGPKDETVA
SFWRMTWEQKSSIIVMVTRCEEGNRVKCAQYWPSTTSTPEVFEEFEVKLNKEEQCPDYII
RLLTLSNKRDNTEREVTQIQFTSWPDHGVPEDPQLLLKLRKRVNAFKNLFSGPIVIHCSA
GVGRTGTYISIDAMMESLESERRMDIYGYIVNLRKQRCLMVQVETQYILIHQAMIEHNEF
GETEIGLSEFHSTLSVLQETGSGVETSLLQDEFKRLPKYNNRRTCNTGLAEENQKKNRSS
VLPYDYNRVFVKIEEDHNEPEDRVYEEEDETASSSEEDEDSMKYINASHIDGYWGSGSLI
TAQSPLVNSTADFWLMVFQKRAAAIVNLSDGTQGDSECSPYWGQEKTKFEDIEVEVTETE
CTPVFTVRTMQIYHTKRKESRQVKQFHFLQWPTQNLPESGGLLTDMIRSVKQTCGCSTGP
LEGRGPVVVHCSDGSRQCGVFCALWNLLDSAQTERMVDVFQIAKAQRRQRQGMISSVEQY
QFLYEALAAAYPVQNGSVTAAPVTVAAGDAVHIIDETGRTQEPAGITADGQQEEAASTPL
IQKEEKEEKEEKEAADNGSTVTLEV
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggctgggctcgacggactcagggtactgctgctgctggctgggctggtcgccatggca
aactgtcaggtgaatcccaatggtcaggtgacacccactgtaaagccgacgactcccact
ggtcaggtgaatcccactgtagtagtagttctggcgactcccactggtcaggtgaatccc
actgatcagagtaccacagtctcaccctcacgcactgcagtcccaacctcaagcactgca
gtcccaacctcaagcaatgcaacctcaccctcaagcaatgcaacctcaccctcaagcact
gcagtcttacccacaagcactgcagtcttacccgcaagcactgcatcctcaccctcaagc
aatgcatcctcaccctcaaccaattcatcctcaccctcaaccaattcatcctcaccctca
accaatgcatcctcaccctcaaccaattcatcctcacccgcaagcactgcatcctcaccc
ttgaaaacttcaactccaaacccaagcagtcttccccagaccgctgccacacaaaccagt
gttcccacagccaccacaggtcctccaccccccctgtgtaattacagtggggaagcatat
aagactggctttctgttgacctttgaaaacgtcactgagggcaactacagcatcgagctc
actaaacgaagcaccaatgaatcgaacaaagtgaccgtggccctgagtggcacaaaccaa
acccatcttctacaatacctaaagccttcgactaattacacagttcacattagtccaagc
aaacatctaacagtaacgtgtggtaggaatctggaactgaaaaccaatggcatcaatcag
gatgaaattgtagaacttccaaccgattcctaccaagatatttgttacgagactgaatgg
aatatctggaataccgtgtttaatgtgtcaagcaaaaagtataaattctgcatcaaaccg
aagtacacagacctttgtacaaatttgacaaccccattgaacagttatcccccattgaac
ttcaccaaatggatcagtttagaatacttgaatccggacaacattaaacttgaagttccc
aataaacttccagcagaaatcaactggaagaatcaaatggatttaaaatgtgaaggtctt
ggaattaatttcacctgcgaaggccctgataaaaagaaatacaagctggataagctagag
ccttacacgaaatacacatgcactggtgtactgtataacctgcataacaaaaccattgcc
attgaaaagagagtcaccaaagaagtcaacatcacttgtgatctagaactgaaggtgacg
gatacacctagcaaagaaagtgtaaagtttaaatggaatgcaagcagcaaacactgtcca
aatctctcacagcataacgacctctcgtacaattgtagctgtgttgggaaagacaaggct
cgttacactccctcctcaaaggaacgttcttgtgaagtgactggtttgctgccctacact
aagtataattgcaaaattcaacctcgtttcaacgataaacccattggcaggccacacgga
gagggacacatttgtaccagcgctggagtgcccaaaaacgttacaattaaaagaacaact
caggtggagaacaatgccttccaggtggaatgcactgatttaatagagggcgattggaga
ggtccaaaaggatcgtaccacgccacaatcacacctggagttcacaagaaaatgcaaaac
agaagttgttttttccaattcggtgatctgagctactccacggggtacacggtatcgatc
gtcgccttcaatggagtgaattccgggaaagcgttgatagtcaaacttcagaccagctac
aacgacagagttctgattgggttcctggtgttcctcatcctgctcacggctctggccctg
tcctttgtgctctacaagatctacattctgcagcgcaagaagacacaccaggatgatggt
ctcctgcttactccacagacaaacgaggaagaccaactcatgcatctggagcccatcggg
gcggaggtcctgctcgacgtctacaagaagaagatcgccgacgagggaaggctgttcctg
gccgagtttcagagcgtccccaggatcttctccaggaacaccatgaaggaggccaagagg
tcgtacaacgccgtgaagaaccgctacgtggacatcctgccttacgactataaccgcgtt
cagctgaccagtgggaacggagagcacgggtgtgactacatcaacgccagcttcatcaac
gggttccaagaaccgaagaagtacatcgcagctcaaggacccaaggacgagaccgtggct
tccttctggaggatgacctgggagcagaagtcctccattatcgtcatggtgacacgctgc
gaggaagggaacagggtgaagtgcgcccagtactggccgtccacgaccagcacgccggag
gtctttgaggagtttgaagtcaagctcaacaaagaggagcaatgtccagattacatcatc
cgccttctcaccctgtccaacaagagggataacactgagcgggaggtgacccagatccag
ttcaccagctggccggaccacggggtccccgaagacccccaactgctgctgaagctccgc
aagagggtcaacgccttcaagaacctgttcagcgggcctatcgtcatccattgcagcgcc
ggagtgggccggaccgggacctacatcagcatcgacgccatgatggagagcctggagtcg
gagcgccggatggacatctacggctacatcgtcaacctgcgcaagcagcgctgcctcatg
gtgcaagtggagacccagtacatcctgatccaccaggcgatgatcgagcacaacgagttt
ggcgagacggagatcggcctgtctgagttccacagcaccctgagcgtgctgcaggagacg
ggctctggggtggagaccagcctgctgcaggacgagttcaagaggctgcccaagtacaac
aacaggaggacctgcaacaccggcctcgccgaggagaaccagaagaagaatcgctcgtcc
gtccttccatacgactacaacagagtgttcgtgaagatcgaggaggaccacaatgagccc
gaagaccgggtctacgaagaggaagacgagacggcctcctcctccgaggaagacgaggac
tccatgaaatacatcaacgcctctcacatcgacgggtactggggctccggcagcctgatc
acagcgcagagccctctggtcaacagcaccgccgacttctggctcatggtcttccagaag
agagccgcggccatcgtcaatctgtccgacggcacgcaaggcgattccgagtgttctccc
tactggggtcaggagaagacgaagtttgaggacatcgaggtggaggtgacggaaacagag
tgcacgcccgtgttcaccgtccgcaccatgcagatataccacaccaagcggaaagagagc
cgtcaggtgaagcagttccacttcctccagtggccgacccagaatctccctgagagcggc
ggcctgctgacggacatgatccgctccgtcaagcagacctgtggctgcagcacggggccc
ctggagggccgcggccccgtggtggtccactgcagtgacggctcgcggcagtgcggtgtg
ttctgtgcactgtggaaccttctggacagcgcccagacggaacgcatggtggacgtcttc
cagatcgccaaggcccagcgcaggcagaggcagggcatgatcagcagcgtggagcagtac
cagttcctgtacgaggcgttggcggccgcctaccccgtgcagaacggaagtgtgacggcg
gcgcccgttaccgtggcagccggggacgccgtgcacatcatcgacgagacgggacgaacc
caggagccggccggtattaccgcggacggccagcaggaggaggcggcgagcacgcctctg
attcagaaggaggagaaggaggagaaggaggagaaggaggcggccgacaacgggtccacc
gttaccttggaggtctga
DBGET
integrated database retrieval system
