Gadus morhua (Atlantic cod): 115556094
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Entry
115556094 CDS
T10832
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F-like isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04514
Cell adhesion molecules
gmh04520
Adherens junction
gmh04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115556094
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115556094
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
115556094
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmh01009
]
115556094
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmh04515
]
115556094
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115556094
Protein phosphatases and associated proteins [BR:
gmh01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115556094
Cell adhesion molecules [BR:
gmh04515
]
Immunoglobulin superfamily
Type II RPTP family
115556094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
PTP-SAK
ig
Tc-R-P
Fn3_VIN3
DSPc
Y_phosphatase3
Interfer-bind
PTPlike_phytase
PTP-NADK
Ig_C17orf99
C2-set_2
CRLF2-like_D2
Fn3_ELFN
Motif
Other DBs
NCBI-GeneID:
115556094
NCBI-ProteinID:
XP_030229078
Ensembl:
ENSGMOG00000004387
LinkDB
All DBs
Position
12:18115186..18172777
Genome browser
AA seq
1920 aa
AA seq
DB search
MSAPGLRWMSAPGLWAPVCVLLARLMVLAHAGSAPSFFRAPDDQIGISGGVASFVCQALG
DPRPRITWMKKGKKVSSQRFEVIEFDNGSVLRIQPLRTHRDEAMYECTASNSVGEINTSA
KLTVLEEDQVPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEIFWFKDFLPVEIDSS
NGRIKQLRSGGTPIRGALQIELSEEADQGKYECVAVNNAGTRYSAPANLYVRDQREVRRV
PPRFSIPPTDHEVMPGGDVNLTCVAVGAPMPYVKWMSGALDLTREDETPVGRNVLELTNV
RDSANYTCVAISSLGMIDTTAQITVKALPKPPSTLIVTETTATSITLTWDSGNPEPVFYY
VLQYHPKLSINGFQEVDGVATTRYSIGGLSPYSEYEFQVIAVNNIGRGPPSSAIAARTSE
QAPSSPPLHVQARMLSPSTLLVQWEPPEEPNGQIRGYRLYYSSRPDTPLSSWHRHNTDDG
EMTSLLGLTPDTTYNLRVLGFTSKGDGPLSEVLQVRTQQGVPVQPFGFEAEAELDTRIML
SWQWPVNDQIVNLELIYWEASDLANKVQITLEPMGSYAVEGLRPDTLYMFSLAARSELGL
GVFTQPIEARTSQSTLPLELHLLSLSSTSIQVSWVAPHAASRHGNIASYSLAYQALSGEG
AARRVVTGIGINVSSYVLEDLERWTEYVVWLKTHSDKGLGPESPAAHTRTQEDVPGAPPR
KLEAYALNSTAFRATWKPPLPVKQHGQIRGYQVVYTRLENGEPHGQPLIVDVSLPEVQEA
TVTGLLPEKSYSVTVAAYTSKGDGARSKAKVVTTTGAVPGKPTMMISTTIGNTALIQWQP
PKEMVGEHTGYQLQYKRAEEGAFTVKDFKKTDDHFTVTGLYKGATYIFRLCAKNRAGPGE
EYVKAVSTPEDVPGSYPQNLSVVDLSDTSTALSWDPPPLAERNGRIVQYLVVYRDINSQQ
NTTNTTADTQMTIQGLKPDTTYDIRVRAFTSKGSGPLSPSIQSRTMSSSPPEFTKNFVVK
AVTKTSVLLTWEVPETYQSQVAFKILYNQQSVEVQAHLRKKLIRGLQPETEYSFMLMSRG
SSAGGLQQQVSIRTAPDMLHVKPAHLQQNPEEGGKLTFSLPQVPNDVSVRWYYVVVVLVT
PASLQMWESPEDMDLNELLETDMDPSIYRRRRQIEDVPQPYIAAQLESLPEAFTLGDEKH
YHRYYNRALPGQQLCLCFVLAELTDQDSQQQKVFVASPFSEPVVLSFQTMPWPSEDPEML
WVMGPVLAVLLIIGTVIAILLLKSKQEGKRGSLTAKDEYLVAGVKDSLLPQTPDPVEMRR
LNYQTQGSRSPKCPNTTRMREHPPVATSDLLDHIERLKANDGLGFSLEYEAIDPGQQFTW
EHSNLDVNKPKNRYANVIAYDHSRVVLSPVDGVPGSDYINANYMDGYRKQNAYIATQGPL
PETLGDFWRMVWEQQTSTIVMVTRLEEKSRLKCDQYWPSRGTETYGMIQVAMLDTVELAT
YILRTFALFKNGSSERREVKQFQFLAWPDHGVPEHPTPTLAFLRRVKACNPLESGPMVVH
CSAGVGRTGCFIVIEAMLERIKYEKTVDAYGHVTCMRAARNYMVQTEDQYVFIHEALLEA
TICGCTEVPARSLFAHIQKLSQNAPGETLTPMELEFKKLANSKAHTSRFISANLPCNKFK
NRLVNIMPFESSRVCLQPLRGVEGSDYINASSIDGYRQQRAYMATQGPLAETTEDFWRML
WEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDA
RDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTG
VFIALSIVLERMRYEGVVDLFQTVKMLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYGP
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcccctgggctcagatggatgtcggcccctggtctctgggcccctgtctgcgtg
ctactagccaggctgatggtgctggcccatgcaggaagcgcgcccagtttcttcagagcc
cctgatgaccagataggaatatctgggggcgtggcgtccttcgtgtgccaggcgctgggg
gaccccagaccccgcatcacctggatgaagaaagggaagaaagttagctctcaacgtttt
gaggtgattgagtttgacaacggctcagtgctacgcatccagcccctgcggacccatcgg
gacgaggccatgtacgaatgcacggccagcaatagtgtgggagagatcaacactagtgcc
aagctcactgttctggaagaggaccaggtcccccatggcttccccaccatcgacatgggc
ccccagctgaaagtagtggagaggacccgcacagccaccatgctgtgcgctgccagcgga
aacccagaccctgagatcttctggttcaaggatttcctccctgttgagattgatagcagc
aatggacgcatcaagcaactccgttcaggtggtacaccaatcagaggagccctgcagatc
gagctcagtgaggaggcggaccagggcaagtacgagtgtgtggctgtgaacaacgcaggc
acccgatactctgctccagccaacctttatgttcgagatcagcgggaagttcggcgtgtg
cctccgcgcttctccatcccgcccacggaccacgaggtgatgccaggaggcgacgtgaac
ctgacctgcgtggcggtgggcgccccgatgccctacgtcaagtggatgagtggcgcgctt
gacctcacccgggaggacgagacacccgtgggccgcaacgtcctggagctcaccaatgtg
cgggattcagctaattacacctgcgtggccatctcctccttgggcatgattgacaccacg
gcccagatcaccgtcaaagccctgcccaagccaccctccacactcattgtgactgagacc
actgccacgagcatcaccctgacttgggactcaggaaatcccgagcctgtcttctattat
gtcctccagtatcacccaaagctgtccatcaatggcttccaggaagtggacggagtagcc
accactcgctacagcatcggaggcctcagcccttactcggagtacgagttccaggtcatc
gctgtgaacaatatcgggcgcggccccccgagcagcgcgatcgccgcacgcactagcgag
caggcgccctcctcaccccccctgcacgtccaggcacgcatgctgagccccagcaccctg
ctggtccagtgggagccaccagaggagcccaatggccagatccggggctaccgcttgtac
tacagctccaggcccgatacccccctgagctcctggcaccggcacaacacagacgacggg
gagatgacaagcctcctgggcctgacccccgacaccacctacaacctgagggtgctcggg
ttcacctccaagggggacgggcccctctcagaggtgctgcaggtcaggacccagcaggga
gttcccgttcagccttttggctttgaagcagaggctgaattggatacacgcatcatgttg
tcatggcagtggcccgtcaacgaccagattgtcaacttagaactgatttattgggaggct
tctgacttggctaataaagtccagatcacgttggagccaatggggtcctatgctgtggaa
ggtcttagaccagacaccctctacatgttctcattagcagcgcgctccgagctgggttta
ggggtgttcactcagcccatagaggccagaacttctcagtccaccctacccctggaatta
cacctgctaagccttagctccaccagcatccaggtgagttgggtagcgccccatgcagcc
agtcgtcatgggaacatagcatcctactcactggcctatcaggcactctctggcgaaggg
gctgcacgtcgagtggtgactgggatcggaatcaatgtgagcagctatgtgctggaagat
ctggagaggtggactgagtatgttgtctggttgaagactcactctgacaaagggctgggc
ccagagagtcctgcggcccacaccagaacacaggaagacgtgcccggcgcccctcccagg
aagttggaggcatacgctctgaactccactgccttcagagcgacctggaagccccccctg
cctgtgaagcagcacgggcagatcagaggctaccaggtggtctacacccggctggaaaac
ggggagccccatgggcagccccttatcgtcgacgtgtccctccctgaagtccaggaggca
accgtcacaggactgctcccagagaagagctactctgtgacggtggctgcctacaccagc
aagggagacggggcccgcagcaaagccaaggtggtcaccacaacaggagctgtcccaggc
aagcccaccatgatgatcagcaccacgataggcaacacggctctgatccagtggcagccc
cccaaggagatggtcggggagcacacaggttaccaactgcagtacaagagggctgaagag
ggggcttttactgtgaaggatttcaaaaagactgacgaccacttcacagtcaccggcctc
tacaagggagcgacctacatcttcagactgtgtgccaagaaccgtgccggccctggggag
gagtacgtcaaggcggtgagcactccggaggatgtgccgggcagctacccccagaacctg
agcgtggtggacctgagcgacacgtccaccgccctgtcctgggaccccccgcccctggcc
gagaggaacgggaggattgtccagtacctggtagtgtaccgggacatcaacagccagcaa
aacaccaccaacaccaccgcggacacccagatgaccatccagggcttgaagccagacacc
acctacgacatccgcgtgcgggcgttcaccagcaaggggagcggaccactcagtccaagc
atccagagcagaaccatgtcctcctccccaccagaattcaccaaaaactttgtcgttaaa
gcagtgaccaaaacctctgtcctgttaacctgggaagtaccagaaacgtatcaatctcag
gttgcttttaagatcctgtacaaccagcagagtgtggaggtccaggcccacctcaggaag
aagctgatcaggggtctgcagccggagacggagtactccttcatgttgatgagccgcggg
agcagcgccgggggtctccagcagcaggtctccatccggacggctcctgacatgctgcac
gtcaagccagcgcacctccaacagaacccagaggagggggggaagctcaccttcagcctg
cctcaggtccccaatgacgtctccgtcaggtggtactatgtagtggtggttcttgtcacc
ccagcttcactgcagatgtgggaaagccctgaggacatggatttaaatgagctcctggaa
acggacatggaccccagcatttaccggcgccggagacagatcgaggacgttccccagccc
tacatcgctgcccagctggagtccctgcctgaggccttcaccctgggtgatgagaagcac
taccaccgctactacaaccgggccctgccagggcagcagctgtgcctctgctttgtcctc
gccgagctcacagaccaagactctcagcagcagaaggtctttgtggccagtccgttttct
gagccggtggtgctgtcgttccaaaccatgccgtggccctctgaggaccctgagatgctc
tgggtgatgggtcctgttctggctgtcctcctcatcattggcaccgttattgctattctg
ctgctcaagagcaaacaagaggggaagcggggttcgctcacagccaaggatgagtacctg
gtagccggggttaaggactcactgctgccccagaccccagacccagtggagatgagaaga
ctcaactaccagacacaaggttccagatcccccaaatgcccaaacacaacaaggatgagg
gagcatccccctgttgccacgagcgacctgttggaccacatcgaaaggctaaaagctaat
gatggcctgggcttctctctggagtatgaggctatagatcctggacagcagttcacatgg
gagcactcaaacctggacgtgaacaaaccaaagaaccgttatgccaatgtcatcgcctac
gaccactccagggtggtcctcagtccggtggacggggttccaggcagcgactacatcaac
gccaactacatggacggctacaggaagcagaacgcctacatcgccactcagggcccgctg
ccagagacactgggggacttctggaggatggtgtgggagcagcagaccagcaccatcgtc
atggtgacacggcttgaggagaaatcaaggcttaagtgtgaccagtactggcccagccga
ggcacagagacgtatggaatgatccaggttgccatgttggacaccgtagagctggccacc
tatattctccgcacctttgccctgtttaagaacggctccagcgagaggcgggaggtgaag
cagttccagttcttagcctggccggaccacggggtcccagagcaccccacccccaccctg
gccttcctccgcagagtgaaggcctgtaacccgctagagtctggccccatggtagtccac
tgcagtgctggagtgggccggaccggctgcttcatcgtcatagaagccatgctggagagg
atcaagtacgagaagacggtggacgcctacggtcatgtgacctgcatgcgtgcggccagg
aactacatggtccagaccgaggaccagtacgttttcattcacgaggccctgctggaggcc
actatctgtggctgcacggaggtcccagcccgcagtctgttcgcccacatccagaaactt
tcccagaatgcacctggggagacgctcacccccatggagctggagttcaagaagttagcc
aactctaaagcacatacctcaagatttatcagtgccaacctgccatgcaacaagttcaag
aaccgcctggtgaacatcatgccttttgagtccagccgggtctgcctgcagccccttcgg
ggggtggagggctcggactacatcaatgccagctccatcgatggctacaggcaacagaga
gcctatatggctacacagggccccttagcagagaccaccgaggacttctggaggatgctc
tgggaacataactccaccattgtcgtcatgctcaccaaactccgggagatggggagggag
aagtgccatcagtactggccagctgagcgatcagcccgctaccagtattttgtggtggac
cccatggcagagtacaacatgcctcagtacatcctccgagagttcaaggtcacggacgcc
agggatggccagtctaggaccattagacagtttcagtttactgactggcctgagcaaggt
gttccaaaaaccggagagggcttcattgattttattggccaggttcacaaaaccaaagaa
cagtttggacaagatggaccgatcaccgtacactgcagtgcgggtgttggacggacaggt
gttttcatcgctctgagcattgtgctggagaggatgagatacgagggagtggtagacctc
ttccagacagtcaagatgctgagaactcagagacccgcaatggtgcagacagaggaccag
taccagttatgttacagggcagcgctggaataccttggaagctttgatcactatgggcca
tga
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integrated database retrieval system
