Gadus morhua (Atlantic cod): 115557287
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Entry
115557287 CDS
T10832
Symbol
sp1
Name
(RefSeq) transcription factor Sp1 isoform X1
KO
K04684
transcription factor Sp1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04137
Mitophagy - animal
gmh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115557287 (sp1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115557287 (sp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115557287 (sp1)
03029 Mitochondrial biogenesis [BR:
gmh03029
]
115557287 (sp1)
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
115557287 (sp1)
Mitochondrial biogenesis [BR:
gmh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
115557287 (sp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-C2H2_8
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
115557287
NCBI-ProteinID:
XP_030230848
Ensembl:
ENSGMOG00000025110
LinkDB
All DBs
Position
13:15711199..15718639
Genome browser
AA seq
671 aa
AA seq
DB search
MNNPQPDEMAAMESGGDFNQKRNTTLQDSQPSSLALLAATCSRMDTPGEGDSPSDQQSNQ
QLDLGHGVMTSNGWQVIPVSLQASSSGSTVSTDSLANSLKNRQVISTSTVGVQGQQQYVV
AQAPTMQGQQVLTTLSSVMPNIQYQVIPQFQTVDGQQLQFAQAQQDPNLGGGQQFQLVST
ANGQQIITTTNRAGGGGNILTMPGLLQGAIPIQNLGLGGGLLQNQPQFQLANMPMSLNGN
ITLLPVSTGAGGADGGGDAGINQLLQQHQAVSTNSGTGYLSGTTTVTTQTANSYGMAQVQ
NSNGVVSSFQHNAASMGVQPDNRDGQQQPQQILIQPQQLIQGGNSLQTIQASAVGGQVFA
TQDGLQNVQIMPNTGPIFLRTVGANGQVSWQTIQLQSPMGGQITLAPVQSLPQLGQAQGA
TVNTVQIPGLQTINLNTLGSSGLQMHQLQGLPITIANPSGDNAQTGGESLDDSTAMDEED
VSPTPQGRRNRREACTCPFCKDGEGRNDPSKKKQHICHIPGCNKIYGKTSHLRAHLRWHT
GERPFICGWSFCGKRFTRSDELQRHKRTHTGEKKFLCTECPKRFMRSDHLSKHIKTHINK
KAASAATGTAVSVDGGSPAAASEAGADVVSGNEQHTLVTMETLSAESIARLASSGVSVLQ
VDLHQMNGTSF
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacccgcagccagatgaaatggccgctatggagagcgggggagacttcaaccaa
aagagaaacacaactctacaagactcccagccatcttctcttgctctgttggctgccacc
tgcagtaggatggacacccctggggagggcgattctccttcagatcaacagtccaaccag
cagctggacttgggccacggggtcatgacgtccaacggctggcaggtcatccccgtcagc
ctccaggcgtcctccagcggttccaccgtttccaccgactccttagccaactcactaaag
aacaggcaggtgatctcgacgtccacggtgggggtccagggacagcagcagtatgtggtg
gcccaggcgccgacgatgcagggccagcaggtgctcaccactctgtccagcgtcatgccc
aacatccagtaccaggtcatcccccagttccagactgtggatggccagcagttgcagttt
gcccaggcccagcaggatcccaatttgggcggagggcagcagttccagcttgtgtcgact
gctaatggccagcagatcataacgaccaccaacagagccggcggaggaggcaacatcctc
accatgcccggtctcctacagggcgccatccccatccaaaacctaggcttaggtgggggc
ctattgcaaaaccagcctcagttccagttggctaacatgcccatgtccctcaatggaaat
atcactctgctgcccgtcagcaccggggcaggtggtgcggatggcggcggggatgcaggc
attaatcagctgctgcagcaacaccaagccgtgtccaccaacagcggcacaggatacctc
tcgggcacgaccaccgtgaccacgcagaccgccaattcctatggcatggcccaggtacag
aacagcaacggagtggtgtcgtcgtttcagcacaatgcggcgtcgatgggtgtccagccg
gacaacagagacggacagcaacagcctcagcagatcctcatccagccccagcagctcatc
cagggcgggaattcgctacagaccatccaagccagcgccgtcgggggacaggtgttcgcc
actcaggacggtcttcagaatgtgcagatcatgcccaacacgggccccatcttcctgcgc
accgtgggcgccaacggccaggtaagctggcagaccatccagctgcagagcccgatgggg
gggcagatcacgctggccccggtgcagtccctgcctcagctgggccaggcccagggagcc
acggtcaacacggtgcagatccccggcctgcagaccatcaacctcaacacgctcggcagc
tcagggctgcagatgcaccagctgcagggacttcccatcaccatcgccaacccgtcaggc
gataatgcgcagacggggggagagagtctggacgacagcaccgccatggacgaggaagac
gtcagcccaacccctcaaggaagacgcaaccgcagggaggcgtgcacctgtcctttctgc
aaagacggggagggccgcaacgacccctccaagaagaaacagcacatctgccacatcccg
ggctgcaacaagatctacggcaagacgtcccacctcagagcccacctgcgctggcacacg
ggggagcggccgttcatttgcggctggtccttctgtggcaagcgcttcacacgctccgac
gagctccagcgccacaagagaacgcacacaggtgagaagaagttcctttgcacagagtgt
ccgaagcgctttatgcgcagcgatcacctctccaagcacatcaagacccacatcaacaag
aaggcggcgtcggcagccactggcaccgcggtctcggtcgacggcggttcgccggcagcc
gcctcagaggccggtgccgacgtagtgtcgggcaacgagcagcacaccctcgtcaccatg
gaaaccctgtcggccgagagcatagcgcgtttggccagcagcggcgtcagcgtgctgcag
gtggaccttcaccagatgaacggcaccagcttctga
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