Gadus morhua (Atlantic cod): 115557536
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Entry
115557536 CDS
T10832
Symbol
rnf123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115557536 (rnf123)
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115557536 (rnf123)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115557536 (rnf123)
Multi subunit type E3
KPC complex
115557536 (rnf123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
115557536
NCBI-ProteinID:
XP_030231270
Ensembl:
ENSGMOG00000014472
LinkDB
All DBs
Position
13:complement(2694726..2832597)
Genome browser
AA seq
1340 aa
AA seq
DB search
MSSKEGGTALTRRNCRLASDTDKPKSTGIVNEKLLTDYLHHVFPSTKPGPTLASLRKPLG
FQDLGSHLEKLLAEGEPPEEDRDAPVEGRLGPNTVVLDHTSGFEGLLFVDDDLLGVIGHS
NFSSIRATTCVYKGKWVYEVLISSQGLMQIGWCTLNCHFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCMIDLDEGTITFCLNGQSLGTAFTDIKMGPGVAYFPAISL
SFKESVAFNFGSRPLRYPVEGYLPLQNPPTAELLKAQKLLGYIKTVLATTIDVQEERLVE
KDCSSWKLHGEPTVLLAMAHIFNHFAPLMCKVYLVEDVLMSFLLSILEGGGSVDEHPLIQ
QLLDLFWLLMEDYEVNECLKQLMMSLLRAYRFSPIIPDLGFQIHYLRLTTAILHHEKSRK
YLLSNVLFDVLRSVVFFYIKTPLRVKEAGLEELIPTTWWPTRFDKEGKDELEAKSETADE
RLRRRAYERGCQRLKKRIEVVEELQVQILRLLLNNKDRGTGEASRYIFLNKFRKFLQENA
SNRGHPTALCPPEYMLCFLHRLITAVRSYWDEGKRKGPGCINSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDELASKTNIIIDPAEILTTSMDDLDEDEESGAAQRPFGAAAM
GGALARPSWLSSPTLGRANRFLSTAAVSLMTPRRPLAPPEKVKVRTLAVEQRTEEDIEGS
HGNDGLLLGRPLEEPDQPIAEKSLLEIVDGIVMMYNLSVHQQLGKMVVVSDDVHEYAMAL
KDTEEKIARCPARRADILDELQKSQKVFAEKLNHLSRRLAWINATVYSKEKMLDVYWLLR
VCIRTVEHADHTGSLFAFAPEFYLNVAMNAYSALKNYFSPANSMDDLPGYEDTLTQLAAI
LAKHFADPRIVGTDIKDSLMQALASYVCYPQSLRAVERIPEEQRVAMMRNLLAPYEQRPW
AQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDTNLPSLQRDLSLASLRKPCPSLLLQRH
MAELLSMDKDMAASFLNSVLNQLNWAFSEFIGMIQEIQQAAERPERNFVDTRQLKVCATC
FDLSVSLLRVLEMTVTLVPEIFLDWSRPSAELLLRRLAQLLNQVLNRVTAERNLFDRVVN
LRLPGLESVDHYPILVAVTGILVQILVEGQRQGISRAASVLLSDPCFQLHSIQHLLGEGG
EPAGSSTTAAPSPPPVVGPLGAALAPAVSPGPGAGGPADRKHFSLHAYTDYISEEEERKV
EGMLAFLTEESKQAAASTAPTSEEDLCPICYAHSISAVFKPCSHKSCKACINQHLMNNKD
CFFCKATITGVEDYTKPASS
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaaggagggtggaacggccctgacccgccgcaactgccggctggcctcggac
accgacaaacccaaatccacaggcatcgtcaacgagaagctcctgactgactacctgcac
catgtgttcccctccaccaagcccgggcccaccctggcctccctcaggaaacccctggga
ttccaggaccttggatcccacctggagaaacttctggcagagggagagccccctgaggag
gacagagacgcgcccgtcgagggccgcctggggcccaacacggtggtcctggaccacacc
agcggcttcgagggcctcctgtttgtggacgacgacctgctgggggtcatcggccacagc
aacttcagctccatcagagcgactacatgtgtatataaagggaaatgggtctacgaggtg
ttgatatcctctcaaggtctgatgcagatagggtggtgtacactcaactgtcacttcaac
caagaggagggtgtaggggacacgccggactcctacgcctacgacgggaacagagtccgc
aagtggaacgtgacgacaaccaactatggcaagtcgtgggctgcgggagacattgtgagc
tgcatgatagacctggatgaaggaaccatcacgttctgcttaaacggccagtctctgggc
acagccttcacggacatcaagatgggtccaggcgtggcctacttccctgccatcagcctc
tccttcaaagaatccgtggccttcaacttcgggagcagacctctcaggtaccctgtggag
ggctacctccccctgcagaacccccccaccgcggagctcctgaaggcccagaagctgctg
ggctacatcaagaccgtgctggccaccaccatcgatgtccaggaggagaggttggtggag
aaggactgttcctcgtggaaactccacggggaaccaaccgttctcctcgccatggcccac
atcttcaaccactttgctcccctcatgtgtaaagtgtacctggtggaggatgtgctgatg
agcttcctattgagtattctggagggcggaggttcggtggacgaacatccactcatacaa
cagctgcttgacctcttctggctcctgatggaggactacgaggtgaacgagtgcctgaag
cagctgatgatgtcattactgagggcctatcgcttctcccccatcatccccgatctaggc
ttccagatccactaccttcgtctgaccactgccatcctgcaccacgagaagtctcgcaaa
tacctcctcagcaacgtcctgtttgacgtgctgcgctccgtggtcttcttctacatcaag
acccccctgcgggtgaaggaggcggggctggaggagctgatccccaccacgtggtggccc
acgcgcttcgacaaggaggggaaggacgagctggaggccaagagtgagacggctgacgaa
cggttgcggcggcgtgcgtacgagagaggctgtcagaggctgaagaagaggatcgaagtg
gtggaggagttgcaggttcagatcctgagacttctgctcaacaacaaagacagagggacg
ggtgaagcgtcccggtacattttcctcaataagttccggaagtttctccaggagaatgcc
agcaacagagggcatcccacagcgctatgtcctccagagtacatgctgtgcttcctccac
cgtctcatcacggccgtccgctcctactgggacgagggcaagaggaagggcccgggctgc
attaacagcgaagaggcctatgttccaccccagctcttctacaatgggaaggtggactac
tttgacctacagagactagggggtctgctctcccatctgaagaagaccctcaaagatgag
ctggccagtaaaacgaacatcatcatcgaccctgctgagatcctgaccacgtccatggac
gacctggacgaggacgaggagagtggagcggcacagcggcccttcggtgcggcggcgatg
ggcggggctttagcgcggcccagctggctgagctcgccgacgctgggtcgagcgaaccgc
ttccttagcacggccgccgtcagcctcatgacccccagacgacccctggccccccccgaa
aaggtcaaagttcgcaccttagctgtggagcagaggacagaggaagacattgaaggaagc
catggcaacgatggcctgttgctggggcgaccgctggaagagccggatcagccaatcgca
gagaagtccttgttggagatcgttgatgggatcgtaatgatgtacaacctgagcgtccat
cagcaactcggcaagatggttgtagtgtcagatgacgtccatgagtacgctatggcactg
aaagacacagaagagaagatagctcgatgccctgcaaggagagccgacattctggatgag
ctccaaaagagccagaaggtttttgctgagaagctgaaccacctcagtagaagactggcc
tggatcaatgcgactgtgtactccaaggagaagatgctggacgtgtactggctgctgagg
gtttgcatccgcacggtggagcacgccgaccacacaggctcgctgttcgccttcgccccc
gagttctacctgaacgtggccatgaacgcctacagcgccctgaagaactacttcagcccg
gccaacagcatggacgacctgccaggttatgaagacaccctgactcagctggcggccatc
ctcgccaagcactttgctgacccgcgtatcgttggtacagatatcaaggactccctgatg
caggcgctggccagctacgtgtgttacccacaatccctcagggccgtggagcggatacca
gaggaacagcgcgtggccatgatgaggaatctgctggctccatatgagcagaggccctgg
gctcagaccaactggatactggtccgactgtggaggggctgtggcttcggctacaggtac
accagactgcctcacctgctgaaaaccaaacccgaggacaccaacctgcccagtctacag
agggacttatctctcgctagtttacgaaagccctgtccgtcactgctgctccagaggcac
atggcggagctgctgagcatggacaaagacatggccgcctccttcctcaacagcgtcctc
aaccagctcaactgggccttctccgagttcataggcatgatacaggagatccagcaggca
gccgaacggccagagagaaactttgtggacacgcgccagctcaaggtgtgcgcgacctgc
ttcgacctgtccgtcagcctgctgcgggttctggagatgaccgtcaccctggtgccggag
atcttcctggactggtcccgcccatcggcagagctgctcctcagacgattggctcagctg
ttgaaccaggtgctgaacagagtcacagcagagaggaacttgtttgatcgggtggtcaac
ctacgtctgccagggctggagagtgtggatcactaccccatcctggtcgccgtcacgggg
atcctggttcagatactggtggagggacagagacaggggatctccagagcagcgtccgtg
cttctgtccgacccctgcttccagctccactccatccagcacctcctgggagagggagga
gagccagcgggctcctccacgaccgcggcccccagcccgccccccgtggtggggcccctg
ggagccgcgctggcccctgccgtctccccgggccccggggccggcggcccggcggaccgc
aagcacttctccctgcacgcatataccgactacatcagtgaggaggaggagaggaaggta
gaaggtatgctggccttcctgaccgaggagtccaagcaggctgccgccagtacagctccc
accagtgaggaggatctctgtcccatctgctacgctcactccatctccgctgtcttcaag
ccctgctcacacaagtcctgcaaagcctgcatcaaccagcacctcatgaacaacaaagac
tgtttcttctgcaaggccaccatcactggagtggaggactacaccaagcctgctagctcc
taa
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