Gulosibacter molinativorax: GMOLON4_47
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Entry
GMOLON4_47 CDS
T08641
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
gmn
Gulosibacter molinativorax
Pathway
gmn03030
DNA replication
gmn03410
Base excision repair
gmn03420
Nucleotide excision repair
gmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GMOLON4_47 (ligA)
03410 Base excision repair
GMOLON4_47 (ligA)
03420 Nucleotide excision repair
GMOLON4_47 (ligA)
03430 Mismatch repair
GMOLON4_47 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmn03032
]
GMOLON4_47 (ligA)
03400 DNA repair and recombination proteins [BR:
gmn03400
]
GMOLON4_47 (ligA)
Enzymes [BR:
gmn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
GMOLON4_47 (ligA)
DNA replication proteins [BR:
gmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GMOLON4_47 (ligA)
DNA repair and recombination proteins [BR:
gmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
GMOLON4_47 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GMOLON4_47 (ligA)
MMR (mismatch excision repair)
DNA ligase
GMOLON4_47 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GMOLON4_47 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
HHH
PTCB-BRCT
HHH_3
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
QUY60776
LinkDB
All DBs
Position
50515..52809
Genome browser
AA seq
764 aa
AA seq
DB search
MATEADTGVDFETARAEVDRLREQIAAWADSYYAKDVQEVPDAEYDAAMARLRELEEAHP
ELESQDSPTQTIGGRASTLFAPVVHRERMLSLDNVFATEELEAWLVRTNAAAGGDVAWLT
ELKIDGLAISLTYERGRLTKAATRGDGRTGEDVTENVEFIRAIPQRLAGEADALPEVVEV
RGEVFFRVDDFEELNALQVAAGESAFANPRNAASGSLRQKAEGKSADRLQLMRDRLSRLS
MYVHGIGAWANPPVANQSEVYELLSSWGLPTSPHTRVCHATAEVLEYVTEFGERRASIEH
QLDGIVVKVDDLAQHEELGATSRAPRWAIAYKYPPEEVHTELLDIRVGVGRTGRVTPYAV
MRPVTVAGSTVTFATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEVLGPVLEKRPADAREF
VMPTECPECGSTLRPMKEGDVDLRCPNARSCPAQVRGRVEHIGSRQGLDIEVLGEVTAAA
LTQPDVPEEPPLTTEARLFELQLEELVPIIVTVKDADTGEPRVDSDGQPRQRTPFRTSTK
AYPPGAENMTTAERRAAGIKKDHVVYSPSKQAEKLLEELEKAKTKELWRQLVSLNIRHVG
PVAARALADWFGSLAAIRAASVEELSNVEGVGPIIAESISEWLTVDWHLEIIDRWSAAGV
RFATPGHPGPGNNEAVEGPLTGLTVVATGTLEGFTREGAKEAIIAAGGKAASSVSKKTDF
VAAGPGAGSKLTKAEELGIPVLDADGFRALLEGGPDAVAGLSQA
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgaggccgataccggagtggacttcgagactgcgcgtgccgaggttgatcgg
cttcgagagcagatcgccgcgtgggcggacagctactacgcgaaggacgtgcaggaggtc
ccggacgccgagtacgacgccgcgatggcccgactccgggaactcgaggaagcgcatccc
gagctcgagtctcaggactcgccgacgcagaccatcgggggccgcgcatccaccctcttc
gccccggtcgtgcaccgggaacggatgctctcgctcgacaacgtgtttgcgaccgaagag
ctcgaagcgtggctcgtgcgcacgaacgcggccgcgggcggcgacgtcgcgtggctgacc
gagctcaagatcgacggcctcgcgatctcgctcacgtacgagcgcggtcggctcacgaag
gccgcgacccgcggtgacggtcgcaccggtgaggatgtgaccgagaacgtcgagttcatc
cgcgccatcccgcagcggctcgcgggcgaggcggatgcgctgccggaggtcgtcgaggtc
cggggcgaggtcttcttccgtgtcgatgattttgaggaactcaacgccctgcaggtcgcc
gcgggggagagcgccttcgcgaatccgcgcaatgcggcctcgggctcgctgcggcagaag
gccgagggcaagtccgccgatcgcctgcagctgatgcgtgatcggctgagccgactcagc
atgtatgtgcacggcattggtgcgtgggcgaacccgccggttgcgaatcagtcggaagtg
tacgagttgctgtcgtcctggggcctgccgacgagcccgcacacgcgggtgtgccatgcg
accgcggaggtgctggagtacgtcacggagttcggcgagcgccgcgccagcatcgagcac
cagctcgacgggatcgtcgtcaaggtcgacgacctcgcgcagcacgaggagctcggggcg
acctcgcgggcgccgcgctgggcgatcgcctacaagtacccgcccgaggaagtgcacacc
gagctgctcgacattcgcgtcggcgtcggccggacggggcgcgtgacgccctacgcggta
atgcgcccggtgacggtggcgggctcgacggtcacgttcgcgacgctgcataaccaggac
gtcgtgaaggcgaagggcgtgctgatcggcgacacagtggtgctgcgcaaggccggcgac
gtgattcccgaagtgctcgggcccgtgctcgaaaagcgcccggcggatgcgcgcgagttc
gtcatgccgaccgagtgtcccgagtgcggctcgacgctgcgcccgatgaaggagggtgac
gtcgacctgcgctgcccgaacgcgcgcagctgcccggcgcaggtgcgcggtcgagtcgag
cacatcggctcgcgccagggcctcgatatcgaggtgctcggcgaggtcacggctgcggcc
ctgacccaaccggatgtgcccgaggagccgccgctgacgaccgaggcgcggctgttcgag
ctgcagctcgaggagctcgtgccgatcatcgtgacggtgaaagacgccgacacgggcgaa
ccgcgcgtcgacagcgacggccagccgcgccagcgcacgcccttccgcacgagcacaaag
gcctacccgcctggtgccgagaacatgacgacggccgagcgtcgcgccgcgggcatcaag
aaggaccacgtcgtctacagcccgagcaagcaggccgagaagctgctcgaggaactcgag
aaggcgaagaccaaggagctgtggcggcaactcgtgtcgctcaacatccgccacgtcggc
ccggtcgccgcccgcgcgctggcggactggtttggttcgctcgccgcgatccgcgcggcc
tcggtcgaggagctttcgaatgtcgagggtgtcggaccgatcatcgcggagtcgatcagc
gagtggctcacggtcgactggcacctcgagatcatcgaccgctggagcgcagccggcgtg
cggttcgcgactccagggcatcccggccccggcaacaacgaggccgtcgaaggcccattg
accgggcttaccgtcgtcgcgaccggcacgctcgagggcttcacgcgtgagggggccaag
gaggcgatcattgccgcggggggcaaggccgccagcagcgtgtcgaagaagaccgacttc
gtcgcggccggcccgggcgccgggtcaaagctcacgaaggccgaggaattggggatcccg
gtcctcgatgccgacgggttccgtgcgctcctcgagggtggtccggacgcggtcgcgggt
ctcagccaggcctaa
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