Gimesia maris: GmarT_53680
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Entry
GmarT_53680 CDS
T06180
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gmr
Gimesia maris
Pathway
gmr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GmarT_53680 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmr03400
]
GmarT_53680 (pdg)
Enzymes [BR:
gmr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GmarT_53680 (pdg)
DNA repair and recombination proteins [BR:
gmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GmarT_53680 (pdg)
Prokaryotic type
GmarT_53680 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QEG19468
LinkDB
All DBs
Position
6978267..6978968
Genome browser
AA seq
233 aa
AA seq
DB search
MAKNNSQIAAGSGYSDSLDDKKKHARKIARGLARLFPEPECALIHDSPFQLLVATILSAQ
CTDERVNATTPTLFKKYPTAEKLSTSKQADVEKIVYPLGFFRAKATNIRKMALAVTEQYA
GEIPRTLKELVALPGVGRKTANVVLGTAFGIPSGVVVDTHVKRICNIFGLTTSKNPEIIE
RDLMEVLPKKEWIAFSHRVILHGRATCVARKPRCTECSLLKICPRIGLKPLTE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataattcgcagattgcagcaggttccggttatagcgactcacttgatgac
aaaaagaaacatgcccgcaaaatcgcgaggggactggctcgactgttcccggaaccggag
tgcgcgctgattcatgattcgccgtttcagctgctcgtcgcgaccattctctccgcacaa
tgcactgacgaacgcgtgaatgcaactacgccgactctgttcaagaaatatccgacggcg
gaaaaactgtcgaccagtaaacaggccgatgttgaaaagattgtgtacccgcttggcttt
ttccgcgccaaagcgaccaacattcgcaagatggctttggctgtcacggaacaatatgca
ggcgagattccccgcacgctcaaagaactggtggcattaccgggtgtcggccgtaaaaca
gccaatgtggttctcggaactgcattcggaattcccagtggcgtggtcgttgatacgcac
gtcaaacgcatctgcaatatcttcgggctgaccaccagtaaaaacccggagatcattgaa
cgcgacctgatggaagtcctgccgaaaaaagaatggatcgccttttcccatcgggtcatt
ctacacggccgtgccacctgcgtggcccgcaaaccgcgctgtacggaatgcagcctgctc
aaaatctgcccgcggatcggcttgaagccgctcacggagtga
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