Gemmata massiliana: SOIL9_18810
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Entry
SOIL9_18810 CDS
T06634
Name
(GenBank) rnd family efflux transporter mfp subunit : RND family efflux transporter, MFP subunit OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0100 PE=4 SV=1: HlyD_2
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gms
Gemmata massiliana
Pathway
gms01501
beta-Lactam resistance
gms01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SOIL9_18810
01503 Cationic antimicrobial peptide (CAMP) resistance
SOIL9_18810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gms03036
]
SOIL9_18810
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gms02000
]
SOIL9_18810
01504 Antimicrobial resistance genes [BR:
gms01504
]
SOIL9_18810
Chromosome and associated proteins [BR:
gms03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SOIL9_18810
Transporters [BR:
gms02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SOIL9_18810
Antimicrobial resistance genes [BR:
gms01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SOIL9_18810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
UBD
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
VTR95833
UniProt:
A0A6P2D421
LinkDB
All DBs
Position
1:complement(6118824..6120233)
Genome browser
AA seq
469 aa
AA seq
DB search
MTHTPKHFRWSRLALLALVVAGVAGGGWFAVARGKPLFDEKAHAEEPKTAPQTTAEVVSP
HAGGIDRVCVQPGTVEPLESADLCAKVSGFLIEQTVDIGSAVKKGDVLARIAVPEYQKQT
ERDRARVTAAEAKVRQMEAHVTAAESESKSAEASVALANVLVRAKKAYRQYREKQLNRFR
ELAAQKAIEQRVVDEQEDYYLAAFEGENEAKEAVRAAIERLATAKAKIAQAKADVEQAKA
EVGVATADLERTQVFLDYAVIRSPYTGVVTRRTFHVGDFVKSADQGAAQPLLSVTRTDVM
RVVIQVPDRDVPYVTVGDPAAFEVGAPDLRIKFATRGISRLAKVQDPATRMMRVEVDVDN
PTDANHPDGVLYSGAYGHATLTLQVGAPNAVRVPTIALSNRSPGKGSVRVMHGDRIQTVP
VTIGSDNGVEAEVLTGLTPVDRVVLRVSNPVDDGAVVATTGAKVATAAH
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacacacactcccaaacattttcgttggtcccggctcgcgctcctcgccctcgtcgtt
gcgggggtggcgggcggcgggtggttcgccgtggcacgcgggaagccgttgttcgacgag
aaagcgcacgccgaagagccaaaaacggccccgcagacgaccgccgaggtcgtttcgccg
catgctggtgggatcgatcgcgtgtgcgttcagcccgggaccgtcgagccgctggagtcc
gcggacctgtgtgccaaggtgtccgggttcttgatcgaacaaacggtggacatcggtagc
gcggtgaagaagggcgacgtgctcgcgcggatcgcggtgcccgagtaccagaagcagacc
gaacgcgaccgggcgcgcgtgacggccgccgaagcgaaggtgcgccagatggaggctcac
gtgacggcggccgagtccgagtcgaagtcggccgaggcgtcggtcgcgctggcgaacgtg
ctcgtgcgggccaagaaagcataccgccagtaccgcgagaagcagctcaaccggttccgc
gaactcgccgcgcagaaggccatcgagcagcgcgtggtggacgagcaagaggactactat
ttggccgcgttcgagggcgagaacgaggcgaaagaagccgtccgtgcggcgatcgagcga
ctcgcgactgcaaaagccaagatcgctcaggcgaaggccgacgtggagcaggcgaaggcc
gaggtcggcgtcgcgacggcggacctggagcgcacgcaggtgttcctcgactacgcggtc
atccggtcgccgtacaccggggttgtcacgcgccgcaccttccacgtcggcgatttcgtc
aagtccgcggaccaaggtgccgcgcaaccgctcctgtcggtcacgcgcacggacgtgatg
cgggtcgtgattcaggtgccggaccgggacgtgccatacgtcaccgtcggcgacccggct
gcgttcgaggtcggcgccccggacctgcgcatcaagttcgccacgcgcgggatctcccgg
ctggcgaaggtccaagacccggccacgcgcatgatgcgagtcgaagtggacgtggacaac
ccgacggacgcgaaccacccggatggcgtgctgtactcaggcgcttacgggcacgcgaca
ctcacgctccaggtcggcgcgccgaacgcggtccgcgtccccacgattgcgctctcgaac
cgcagcccgggcaagggatcggtccgcgtgatgcacggcgaccgcatccagacggttccc
gtcaccatcggctcggacaacggcgttgaggccgaagtgctcaccgggctgacccccgtg
gaccgggtcgtgcttcgcgtcagcaacccggtagacgacggggccgtcgtcgcgacgact
ggggcgaaagtcgccaccgccgcccactag
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