Gemmata massiliana: SOIL9_26910
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Entry
SOIL9_26910 CDS
T06634
Name
(GenBank) rnd transporter mfp subunit : Efflux transporter, RND family, MFP subunit OS=Burkholderia sp. (strain CCGE1002) GN=BC1002_5413 PE=4 SV=1: HlyD_2
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gms
Gemmata massiliana
Pathway
gms01501
beta-Lactam resistance
gms01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SOIL9_26910
01503 Cationic antimicrobial peptide (CAMP) resistance
SOIL9_26910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gms03036
]
SOIL9_26910
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gms02000
]
SOIL9_26910
01504 Antimicrobial resistance genes [BR:
gms01504
]
SOIL9_26910
Chromosome and associated proteins [BR:
gms03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SOIL9_26910
Transporters [BR:
gms02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SOIL9_26910
Antimicrobial resistance genes [BR:
gms01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SOIL9_26910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
HlyD_2
Motif
Other DBs
NCBI-ProteinID:
VTR95023
UniProt:
A0A6P2D1N1
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All DBs
Position
1:5158800..5160044
Genome browser
AA seq
414 aa
AA seq
DB search
MSVTPSAHSAHHEGPEAAPARPSFFRLAFLAVLVLATLGALGVAGVRARNKQQTDRTETA
EAARTDRPRVLTVTAERAPARVEQVLPGTASPFRETAVYARTSGYLRRWLVDKGDTVSEG
QLLAEIETPEVNAQLLQARAAVAEATATRDRNRASAELARLNLVRVRQTFETGVGSRQEM
DEADAALKVAEATIRLSEANIRAGEANVKRLEDLQQFQKVVAPFSGVITARNYDPGALVV
ADSSSGPEMFHISQTETLRVQVDVPQTFATSVHVGQPAPVSRREEPGREYKGAVGRTTNA
VNVQTRTLRVEVDVPNKDHALLPGMYLQVKFHLDAPAKVIRVPGAAVVTRAEGTKVAVVE
SNGRIGYRTVKVGRDYGTIVEVTEGLTGGEKLVVRPGDDLAEGTEVDPVTATER
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgacaccctcagcgcattccgcgcaccatgaaggaccagaggccgccccggcg
cgcccgtccttcttccgactggctttcctggccgtactcgttctcgctacgctgggcgct
ctcggggtcgcaggtgtgcgagcacgaaacaagcaacagaccgaccgcaccgaaaccgcg
gaagcggcccgcacggaccgaccgcgtgtactcacagtgacggccgagcgcgcaccggcg
cgggtcgaacaggttctccccggcaccgcgtcgccgttccgcgagacggccgtttacgcc
cgaacgagcggctatctccgccggtggctagtagacaagggcgatacggtgagcgagggg
cagttactcgccgagattgagacgccggaagtcaacgcacagttgctccaggcgcgagcg
gccgtcgccgaagcgaccgcgacacgagaccgaaaccgggccagcgccgaactcgctcgc
ttgaacttggtccgcgtgcggcaaacgttcgagacgggtgtcggttcgcgccaggagatg
gacgaagcggacgcggctctgaaggtggcagaggccacgatccgcttgtctgaagccaac
attcgggcgggcgaagcgaacgtgaagcgactggaagacctccagcagttccagaaggtc
gttgccccgttcagtggagtcatcaccgcccggaactacgaccccggagcgctcgtcgtc
gccgatagttcttccggacccgagatgttccacatctctcaaaccgaaaccctgcgcgtg
caagtggacgtgccccaaacgtttgccacgtcggttcatgttggccagccggcacccgta
tctcggcgcgaggagccgggccgggaatacaagggagctgtgggacgaacgacgaacgcc
gtgaacgtccaaacgcgcacgctgcgagtggaagtcgatgtgccgaacaaggaccacgcc
cttctgccgggcatgtacttgcaggtgaagttccatttggacgcgccggccaaagtgatc
cgcgtccctggggctgccgtcgtcactcgtgcggagggcacgaaagtggccgtcgtcgaa
tcgaacggccggatcgggtaccgcacggtgaaagtgggccgcgattacggcaccatcgtt
gaagtcaccgaagggttgaccggtggggagaaactcgtcgtgcgccccggcgacgacctc
gcagaagggacagaggtcgaccccgtcactgcgaccgaacgctaa
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