Gemmata massiliana: SOIL9_31720
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Entry
SOIL9_31720 CDS
T06634
Name
(GenBank) pyruvate dehydrogenase : Pyruvate dehydrogenase E1 component OS=Rhodopirellula europaea SH398 GN=RESH_06116 PE=4 SV=1: Transketolase_N: Transketolase_N
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
gms
Gemmata massiliana
Pathway
gms00010
Glycolysis / Gluconeogenesis
gms00020
Citrate cycle (TCA cycle)
gms00620
Pyruvate metabolism
gms00785
Lipoic acid metabolism
gms01100
Metabolic pathways
gms01110
Biosynthesis of secondary metabolites
gms01120
Microbial metabolism in diverse environments
gms01200
Carbon metabolism
gms01210
2-Oxocarboxylic acid metabolism
Module
gms_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SOIL9_31720
00020 Citrate cycle (TCA cycle)
SOIL9_31720
00620 Pyruvate metabolism
SOIL9_31720
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SOIL9_31720
Enzymes [BR:
gms01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
SOIL9_31720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Lon_lid
Motif
Other DBs
NCBI-ProteinID:
VTR94542
UniProt:
A0A6P2D4Z5
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All DBs
Position
1:4478854..4481625
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AA seq
923 aa
AA seq
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MLVTPDVLALNSARLPEDVDPQETTEWLEAMEAVLKHGGPERAKFLLETLIAVTDRAGAK
MPGGVTTPYVNTIPVEDQPTFPGDRALERKIKSIVRWNAMAMVQKANKNTNVGGHIGTFA
SAATLYEVGFNHFFHGRSADHPGDVVFFQGHASPGMYSRAFVEGRLDETKLNNFRQELKP
GGGISSYPHPWLMPDFWQYPTVSMGLGPIMSIYHARYNRYLRDRELAKTDLARVWAFLGD
GECDEPESLGAISLAGREKLDNLTWVINCNLQRLDGPVRGNSKIIQELEGIFRGAGWNVI
KVIWGTDWDELLKNDHTGALARRMMEVVDGEYCDYVGRDMRTAEEKVTHAKKSDVITDEE
DADRRGAYIRDTFFNTPELKSLVEHLSNKDIAGLKRGGHDPLKVYAAYKAATEHKGQPTV
ILVKTVKGYGMAGDGGQGKFTNHQQKKVAIKEFRDRFELPITDDQLEHIPFYRPADDSPE
MKYMKARRAALGGPQPFRNNEFIPCQPPERKGFERQYEATIQGKPISTTFAWVNLMTAIC
RDPHIGKLLVPIVPDEGQTFGMPPMYKTFGMYSSVGQTYTPVDKGSYTEYRESKTGQILQ
EGINEAGSMASWIAAGTAYSTHGVNTIPFYIYYSMFGFQRIGDLAWAAADARTRGFLMGG
TAGRTTINGEGLQHEDGHSHLMAMTIPTCRTYDPAFAYELAVIVEEGINAMYVRNEECFY
YLTVYNEAYEMPAMPGEHVREGIIRGLYSVKSVKPASAKLEVQLVGSGVILNEALRAQQI
LAEKYNIASTVYSATSYQMLRKDAIECERHNRLHPDATKKVPFVAQVLGGTNGPIIATSD
YMRALPETVAPYLNGRMLALGTDGFGRSETRKALRRFFEVDAENVTVAALYSLFQQGQLD
PGTVKKAIADLGIDPDAAHPWTI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcactccggacgtgttggctctgaatagcgcccgacttcccgaagacgttgac
ccgcaggaaacgaccgagtggctcgaagcaatggaggccgtgctgaaacacggcggaccg
gagcgggccaagttccttctcgaaacgctcattgcggtgaccgatcgtgccggggcgaaa
atgcccggcggggtcacaacaccttacgtcaacacaattcctgtagaagatcaaccgaca
ttccccggtgaccgggcgctcgagcggaagatcaaaagcatcgtccgctggaacgcgatg
gcgatggtacagaaggcaaacaagaacaccaacgtcggtggccacatcggaacttttgcc
agtgccgccacgctctacgaagtcggcttcaatcacttcttccacggtcggtcggccgat
caccccggcgatgttgttttcttccaggggcacgccagcccgggcatgtattcgcgagct
ttcgttgaggggcggctggatgaaacgaaactgaacaacttccgccaggaactgaagccc
ggcggtgggatctcgagctacccgcacccgtggctcatgccggacttctggcagtacccg
accgtcagcatgggcctcggcccgatcatgtccatctaccacgcccggtacaaccgctac
ctccgggaccgcgagcttgcgaagacggacctcgctcgcgtgtgggcgttcctcggcgac
ggcgagtgcgacgagccggagtcgctcggcgcgatcagcctcgccgggcgcgagaagctc
gacaacctcacctgggtcatcaactgcaatcttcagcggctcgatggccctgtgcggggc
aactcgaagatcattcaggaactcgagggcatcttccgcggcgccggctggaacgtcatc
aaggtgatctgggggactgactgggacgagttgctcaagaatgaccacactggcgcacta
gctcgtcgcatgatggaagtggtagacggcgaatactgtgactacgtcgggcgcgatatg
cgaacggccgaagaaaaagtcacacacgcgaaaaaatctgacgtcatcaccgacgaagag
gacgccgatcgccgcggcgcgtacatccgcgacacgttctttaacacgcccgaactcaaa
tctctcgtcgagcacctgtcgaacaaggacatcgcggggctgaaacgcggtgggcacgac
ccgctgaaggtgtacgcggcgtacaaggccgcgaccgagcacaagggccagccgacggtg
attctggtgaagaccgtcaagggctacggcatggccggcgacggcgggcaggggaagttc
acgaatcaccagcagaaaaaggtcgccatcaaggagttccgcgaccgcttcgagctgccg
atcaccgacgaccaactcgaacacatccccttctatcggccggccgacgacagcccggaa
atgaagtatatgaaggctcgtcgggcggccctcggcggcccacagccgttccgcaacaac
gagttcattccatgccagccaccggagcgcaagggcttcgagcgccagtatgaggctacg
attcaggggaagcccatctctactacgttcgcgtgggtgaacctgatgaccgcgatttgc
cgcgatccgcacatcggcaagttgctcgtcccgatcgttcccgacgagggacagacgttc
gggatgccgccgatgtacaagacgttcggcatgtactcgtccgtggggcagacgtacacc
cccgtcgataaggggtcgtacaccgagtatcgcgagtcgaagaccggccagatcctgcaa
gaggggatcaacgaggccgggagcatggcgagttggatcgcggccggcaccgcgtacagc
acgcacggcgtgaacacgatcccgttctacatctactactcgatgttcgggttccagcgc
atcggcgacctcgcgtgggctgcggccgacgcccgcacccgcgggttcctgatgggcggc
accgccgggcgcaccacgatcaacggcgaggggctccaacacgaggacgggcacagccac
ctgatggccatgaccatcccgacgtgccgcacctacgacccggccttcgcctacgaactc
gcggtgatcgtcgaagaaggcatcaacgcgatgtacgtgcgaaacgaggagtgcttctac
tacctcactgtttacaacgaagcgtatgagatgcccgcgatgcccggcgagcacgtgcgc
gaggggatcatccgcgggctgtattcggtgaagagcgtgaagcccgccagcgcgaagctc
gaagtgcaactcgtcggcagcggcgtcattctgaacgaggcgctacgggcgcagcagatc
ctggccgagaagtacaacatcgccagcacggtctacagcgcgaccagctaccagatgctc
cgcaaggacgcgatcgagtgcgagcgccacaaccgcctgcacccggacgcgaccaagaag
gtgccgttcgtggcgcaagtgctcggtggcacgaacgggccgatcattgcgacgagcgac
tacatgcgggcgctgccagaaacggtcgccccgtacctgaacggccggatgctcgcgctg
gggaccgacgggttcggccgctcggaaacccgcaaggcgctgcgccggttcttcgaggtg
gacgcggaaaacgtcacggtcgcggcgctgtactcgctgttccaacaggggcagctcgac
cccggcacggtgaagaaggcgatcgcggacctgggtatcgacccggacgccgcgcacccg
tggaccatctga
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