Gemmata massiliana: SOIL9_54910
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Entry
SOIL9_54910 CDS
T06634
Name
(GenBank) rnd transporter : Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_2294 PE=4 SV=1: ACR_tran
KO
K18299
multidrug efflux pump
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gms02000
]
SOIL9_54910
01504 Antimicrobial resistance genes [BR:
gms01504
]
SOIL9_54910
Transporters [BR:
gms02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SOIL9_54910
Antimicrobial resistance genes [BR:
gms01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
SOIL9_54910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
VTR92223
UniProt:
A0A6P2CTJ4
LinkDB
All DBs
Position
1:complement(1795973..1799338)
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AA seq
1121 aa
AA seq
DB search
MLSYFFIGRPVFATVLSLVVTLAGAVALVNLPMTQYPPITPPNITVSASYPGASAKVVAD
AVAAPIEQEVNGVENMLYMSSNSANDGSYSLSVTFKPGTNLDFAQVLVQNRVNLALPLLP
DVVRQAGVTTRKRNPDMLMVINLYSPTGEYDQLHLSNYAAINIREELARVKGVGDVGLFG
SLDYSMRVWVDPDRLTSMGITAGDVLTAIREQNQQVAAGQVGQSPVPDGQAFEFPIHVLG
RLTAPEEFADIVIRRTADGRQVRIRDVGRVELGAKSVDTSDKLDGKPTANIGVFQLSDAN
ALEVADRVRAKMEELKEAFPPGIEYTIANDSTPFIRESVQGVVKTLTEAVALVAVVVLLF
LQSWRAAVIPLAAVPVAVVGTFAAMAALGFTLNTLTLFGLVLAIGIVVDDAIVVVEAVQH
KIEHGLSPREATRRAMEEVSGPVIATGLVLVAVFVPCAFLGGITGLFFRQFAVTIAVSTA
LSALNSLTLSPALCAILLKPAGVRKDLPGRVLDFLFGWFFRLFNAGVGRSTSLYARCVGL
TVRVTPLVLIAYLGLLGLTWWGFGKLPTGYIPNQDQGRLMCSIQLPDAASLERTQEVVDE
VSRIARETPGVAHTVAVSGRSLPLGANGSNYGTMLITLDPIEQRTHPSRSANAISAGLRK
AFTARLPDALVTVMAPPAVPGLGSAGGFKVMVEDRSGENDILRLQRSTERLIVEGRKDPR
LAGLFTGFRADAPQLFVDVNRQQCQTMGVPVGDVFAAQQAFLGSRYVNDFNRFGRTWQVI
VQAEGPFRHTVEDAKRIRVRNDQGGMVPLGAVLDIREVAGPLVITRYNMHPAAAVMGSTA
PGISSGDGIVAIDQLAARVFPEGTAHEWTEINYIQIDAGKNIWNKLIFPLSVLFVFLVLA
AQYESWALPLAVIPIVPLCVLSSIAGVAVAGSDINVFTQIGFVVLIGLACKNAVLIVEFA
RALHATGRSARDAVVEASRLRLRPIVMTSVAFILGVVPLVFATGSGAEMRRALGTAVFAG
MIGVTVFGLLLTPVFFFVIEWGAEGRLGRTRWVRRIGQGGLDLVRLRPLWSLTRTVVGAT
RGRFRAARSTSPSTRTSVITLQPEPITTRSAVLSNHSEVVP
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgctgagttacttcttcatcggtcggccggtgttcgccaccgtcctgtcgctcgtcgtg
acgctcgccggcgcggtcgcgttggtgaatctgccgatgacgcagtacccgccgatcacc
ccgccgaacatcaccgtttcggccagctaccccggcgccagcgcgaaggtcgtggccgac
gccgtggcagcaccgatcgagcaggaggtgaacggggtcgagaacatgctctacatgtcc
tcgaactcggccaacgacgggtcgtacagtctgagcgtcacgttcaaaccggggaccaac
ctggacttcgcccaggtgctcgtgcagaaccgagtgaacctggcccttccgctgctgccc
gacgtggtccgccaggccggggtcacgacccgcaagcggaacccggacatgctcatggtc
atcaacctgtattcccccaccggggagtacgaccagctccacctcagcaactatgccgcg
atcaacattcgggaagaactggcgcgagtgaaaggggtgggcgacgtcgggctgttcggg
agcctcgactacagcatgcgggtctgggtcgatcccgatcgactgacctcaatggggatt
accgccggcgacgtgctcaccgcgattcgcgaacagaaccagcaggtcgcggcgggacag
gtcgggcagtccccggttcccgatgggcaggcgttcgagttcccgatccacgtcctcggc
cgtctgaccgcgccggaagagttcgccgacatcgtgatccgccgcacggccgacggccgg
caggtgcgtattcgtgatgtcggtcgagtcgaactcggcgccaagagcgttgatacttcc
gataagctcgacggcaagccgaccgcaaacatcggcgtgtttcaactgtccgacgcgaac
gctctggaagtagcggatcgcgtgcgcgcgaagatggaagaactgaaggaagcgttcccg
cccgggatcgagtacacaatcgctaacgacagcacgccgtttattcgcgagtcggtccag
ggggtcgtcaaaactctcaccgaagccgtggcgctggtcgcggtggtggtgctgctgttc
ctccagtcgtggcgcgcggccgtcattccgctcgccgcggtcccggtcgcagtcgtcggc
acgttcgcggcgatggccgcactcggtttcacgctcaacacgctgacgctgttcggattg
gtgctggcgattgggatcgtggttgatgacgccatcgttgtagttgaagctgttcagcac
aaaatcgagcacggtctgtccccgcgtgaagcgacccgccgcgcgatggaggaagtcagc
ggccctgtgatcgcaaccggattggtgctcgtcgcggtgttcgtgccgtgcgcgttcctc
gggggcattacagggctgttcttccgtcaattcgccgtcaccatcgccgtctcgactgca
ctttctgcgctcaactcgctgacgctcagccccgctctgtgcgcgatcctgctgaagccc
gcgggcgtccggaaagacctaccggggcgggtactcgatttcctattcgggtggttcttc
cggctgttcaacgccggggtcgggcggtccacgagcctgtacgctcggtgcgtcgggttg
accgtgcgcgtcacgcccctcgtgctgatcgcgtacttggggttactcgggctgacgtgg
tggggattcggcaagctcccaaccgggtacatcccgaaccaggaccaggggcggttgatg
tgctcgatccagttgcccgacgcggcctcgctggagcgtacccaggaagtggtggacgaa
gtgtcccggatcgcacgcgaaacgcccggggtagctcacacggtcgctgtttcgggccgg
tcgctcccacttggcgcgaacgggtcgaactacggaaccatgctcatcacgctcgatccg
atcgaacagcgcacgcacccttcacgttccgcgaacgcgatcagcgccggtctgcggaaa
gcgttcaccgctcgtctgccggacgctcttgtcacggtcatggctccgccggcggtgccc
ggtttgggatcggccggcggattcaaagtgatggtcgaggaccggagcggagagaacgac
atcctgcgcctccagaggagcaccgagcgcctgatcgttgaggggcggaaagacccgcgc
ctggccgggctgtttaccgggttccgggccgacgcgccgcaactgttcgtggacgtgaac
cggcagcagtgccagacgatgggcgtacccgtcggagacgtgttcgccgcgcaacaagcg
ttcctcggttcgcgctacgtgaacgacttcaaccggttcggccgcacgtggcaggtgatc
gttcaggccgaggggccgttccgccacaccgtcgaggacgcgaagcggattcgggtgcgg
aacgaccagggcgggatggtcccactcggggccgtgctcgacatccgggaggtggccggg
ccactcgtgattacccggtacaacatgcacccggccgctgcggtcatgggttcaacagcg
cccggaatcagttccggggacgggatcgtggcgatcgaccaactcgccgcccgcgtgttc
ccggaagggacggcccacgagtggacggagatcaactacatccagatcgatgccggaaaa
aacatctggaacaagctcatcttcccgctgtcggtgctgttcgtgttcctggtgctggcg
gcccaatacgagagttgggcgcttccgctggccgtcattccgatcgtcccgctgtgcgtc
ctgagttcgatcgcgggcgtggcggtggccggctcggacatcaacgtgttcacgcagatc
gggttcgtggtgctcatcgggctagcgtgcaagaacgcggtgctcatcgtcgagttcgcg
cgggcgctgcacgccaccggacgctcggcccgggacgcggtggtcgaggccagtcggctg
cggttgcggccgatcgtgatgacctcggtcgcgttcattctcggggtcgtcccactggtc
ttcgcgaccggctccggtgccgaaatgcgacgtgcgctgggcaccgcggtgttcgccggg
atgatcggtgtcacggtgttcggtttgctcctcacccccgtgttcttcttcgttatcgaa
tggggcgctgagggacggctgggccgcacccgctgggtgcgccggatcgggcaaggcggg
ctagacctcgttcgcctgcgcccgctgtggagcctgacgcgcacggtcgtcggcgcaacc
cgggggcgtttccgtgccgcccggtcaacttcacccagcacgcgcacgtctgtaatcacc
ttacaacccgaaccaatcacgacccgcagcgcggtcctgtccaatcattctgaggtggtc
ccttaa
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