Girardinichthys multiradiatus (darkedged splitfin): 124855223
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Entry
124855223 CDS
T08099
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04620
Toll-like receptor signaling pathway
gmu04621
NOD-like receptor signaling pathway
gmu04622
RIG-I-like receptor signaling pathway
gmu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124855223 (traf3)
04621 NOD-like receptor signaling pathway
124855223 (traf3)
04622 RIG-I-like receptor signaling pathway
124855223 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124855223 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_4
DUF4201
SPAM
zf-TRAF_2
zf-RING_UBOX
ATG16
MctB
zf-C3HC4_4
Sina_ZnF
FapA
Fez1
Crescentin
TolA_bind_tri
zf-RING_2
FlaC_arch
zf-RING_6
BLOC1_2
DUF724
GAS
Prefoldin_2
DUF1664
KxDL
Motif
Other DBs
NCBI-GeneID:
124855223
NCBI-ProteinID:
XP_047200868
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Position
19:complement(38203957..38217024)
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AA seq
594 aa
AA seq
DB search
MSSGRSANGREVQIPLQQVAPSLVSPLSSALAITPPSHRSANPWPPCDLIPQQSAPAGFQ
PLHGGFRDHFVEKPEAKYCCEACRRVLCEPRQTECGHRFCQSCINDILSHSNPVCPADME
PLFKDKIFRDVCCHREIMALKVFCRSKPNGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERVMRKEIPEHLAWKCKHRESTCEFCMTKMPLTDLQKHKETVCPSFPVSCPNHCSFSSLP
RSELTSHQHDCPKAQVNCLFHRYGCTFKGLNQDMRQHDSTFVAEHLRMMVKGNCLLENKV
ENIKEDLMERCKVLPALSSRLSELESQNEELREKNRQMEQKLATMQKLMSSHSEKLLELE
LELRSLRVLRDEVETLRGTVENVRTRLTTLEQGGRSGPGSTHTLASLETQLNRHDDMLSV
HEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAGKTLSLYSQPFYTGYFGYKM
CARVYLNGDGMGKSTHLSLFFVVMKGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFKP
DPHSSSFRRPTAEMNIASGCPLFVAQSILEAGNYIKDDTIFIKVTVDTSDLPDP
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagggagaagtgctaatgggagggaagtgcagataccccttcaacaggtggcg
ccttcacttgtttctcccctctcttcggccctcgccatcacgccaccctcccaccgctca
gccaatccttggcctccatgcgatctcattcctcaacaaagcgctcctgcaggtttccag
cctcttcatggaggattcagagatcattttgttgaaaagccagaagccaaatattgctgc
gaggcatgcaggcgggtcctgtgtgagccccgccagactgagtgtggacaccgcttctgt
cagagctgcatcaatgacatcctcagtcactcaaacccagtgtgtccagctgacatggag
ccactgttcaaagacaagatctttagagatgtgtgttgccatcgagagattatggcactg
aaagtcttctgtcggagtaaacctaatggctgtcaagagcaaatgagtctgcagcagata
cctgaccacctgaatgtgtgtccgttcttcgaggttccctgtccgctgggtaaatgtaaa
gagagggtgatgagaaaagagattcctgagcacctagcgtggaaatgtaaacacagagag
agcacttgtgaattttgcatgaccaagatgcctttgactgacctacagaaacacaaagag
actgtgtgtccatcgtttcctgtgtcctgtcccaaccactgctccttctcttccctgccc
cggagtgagctaaccagccaccagcatgactgtcccaaagctcaggtcaactgtctgttc
caccgctatggctgcaccttcaagggcttaaatcaagacatgaggcagcatgactcaacc
tttgtggctgagcatctaagaatgatggtcaaagggaactgcttgttagagaacaaggtg
gagaacataaaggaagatctgatggagaggtgtaaggtgcttcctgctctcagcagccga
ctgtcggagttagagagccagaacgaagagctccgagaaaagaaccggcagatggagcag
aagctggccaccatgcagaaactgatgagttcgcattcagagaagctgctggagttagag
ctggagctccgttcacttcgtgtgctaagagacgaggtagaaaccttacgaggaacggtt
gagaacgttcggacaaggctcaccaccttagaacagggaggacggagtggtcctggatca
actcacactcttgcatctttggaaactcagctcaatcggcacgacgacatgctgagtgtc
catgaaatccggttggctgacatggacttgaggttccaggtactggagaccgcaagctac
aatgggactctaatctggaaaatccgggactataagagacggaaacaagaagctgtggca
ggaaaaactctgtcgctgtactcgcagccattttataccggatatttcggatacaagatg
tgtgctcgggtttacctaaatggagacggcatgggcaagtcgacgcacctgtcgctgttc
tttgtggtgatgaagggcgagtacgacgccttgctgccctggcccttcaaacagaaggtg
actctcatgctgatggaccaaggtccttccaggaaacacctgggtgatgctttcaagcct
gatccacacagcagcagcttcaggcgtcccacggcagagatgaacattgcctctggctgc
cctctgtttgtggctcaaagcatcctggaggcaggcaactacatcaaagatgatacaatc
ttcatcaaggttacagtggatacatctgaccttcctgacccatga
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integrated database retrieval system
