Girardinichthys multiradiatus (darkedged splitfin): 124855721
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Entry
124855721 CDS
T08099
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124855721 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124855721 (tdg.1)
Enzymes [BR:
gmu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
124855721 (tdg.1)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124855721 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
124855721
NCBI-ProteinID:
XP_047201699
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All DBs
Position
2:1039094..1050400
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AA seq
456 aa
AA seq
DB search
MEEKLNGSLPVVSPEYLHQWVRSAQQFQALQAQYANFNPQHQFHYPENPTAEAAMAHMET
PEPTMEQLEPADLTKPPAKKRGRTAQPKEPGAPKPPKVPKAPKVPKAPKPPKDPNAPRAK
PGPKPKKAPEAQGDGKQEKIDESFKKVKRKVDRFKGMTEEEVMKKTLPDLLDYNLDYVII
GINPGLMAAFIGRWFPGPGNHFWKCLYLSGFTEEQLNHMHDTTLPVKYKMGFTNMVARAT
PGSKDLSSKELREGGKILVEKLKQYKPLIAVFNGKCIYEMFCRELFGKKPQKLEFGLQPH
KIPECDVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDQLKGIQKATEIEEVDYTFNL
QLAKEDAKRLAIKEEQYDPGYEDAYGGAYLERGAEDGQTENQTNGHCTFSSSANAEGAQE
AATSQTEGRLPDGQWMTQSFADQIPNISSGPKDGSM
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagctgaatggatctctgcctgttgtctccccggagtatcttcatcagtgg
gttcggtcggcccagcagtttcaggctctccaggcccagtacgccaacttcaaccctcaa
catcagtttcactacccagagaatccgactgcagaggccgccatggcacacatggagaca
ccagaacccacgatggagcagttggaacctgctgacctgaccaaacctccagctaaaaag
agaggcagaacagcccaacccaaggaaccaggcgcaccaaaacctccaaaagtccccaaa
gcaccaaaagtccccaaagcaccaaaaccacccaaggacccaaatgcacctagagctaaa
ccaggtccaaaacccaagaaggctcctgaagctcagggtgacgggaagcaggagaagatt
gatgagagcttcaagaaggtaaaaaggaaagtggatcgcttcaaagggatgacagaggaa
gaagtcatgaaaaagacattgcctgacctgctggattacaacctggattatgtcattatc
ggtataaacccaggactgatggcagcttttattggccggtggtttccagggcctggaaat
catttttggaaatgcctgtatctgtctggatttacagaggagcaacttaaccacatgcat
gacacaacactgcctgtcaaatacaaaatgggctttaccaatatggtagctagggcaaca
ccagggagcaaagacctctcgagtaaagaattgcgagaaggaggcaaaattcttgtggag
aagttgaagcagtacaagcccctcattgctgtgttcaatggaaaatgtatttatgaaatg
ttctgcagggaactgtttggcaaaaaaccacaaaagcttgaatttggtctgcagccacac
aagatcccagaatgtgacgtggccttgtacctaatgccttcctccagtgctcgttgtgcc
cagtttcctcgagctcaggataaggttcacttctacatcaaactgagggagctcagagat
cagctgaagggcatccagaaagctactgagattgaggaggtcgactacacatttaatctt
cagttggctaaggaggatgccaagaggttagcaataaaggaggagcagtatgatcccgga
tatgaagacgcttatggtggagcgtatttggagagaggagctgaagacggccagactgaa
aaccagaccaacggtcactgtacattctcatcttctgcaaacgcagaaggagcacaagag
gcagccacatcccaaacagagggtcggctcccagacggacagtggatgacccagtcgttt
gcagatcagattcctaacatcagcagcggaccaaaagatggcagcatgtga
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