Girardinichthys multiradiatus (darkedged splitfin): 124862759
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Entry
124862759 CDS
T08099
Name
(RefSeq) low-density lipoprotein receptor-like isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03272
Virion - Hepatitis viruses
gmu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
124862759
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124862759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124862759
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
124862759
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
124862759
NCBI-ProteinID:
XP_047212825
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Position
X:12442172..12461473
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AA seq
888 aa
AA seq
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MRLPLVLLICVLGHTVAETCKPTEYRCTGRLTYCIPSTWRCDGEVDCVNGADEKNCAPKQ
CTDSEFHCRSGQCVSSSFVCDKDVDCVDGSDEASCPPITCSSVSFQCNNTVCVPQLWACD
GDADCSDGSDEWSQNCDTRNFTRSPIHQCSSQEYQCGSGECIHISWKCDGDTDCFDRSDE
ADCAHSTCHPDEFECGDGTCIHGSHQCNHQYDCKDMSDEVGCVNGTHPFVYSIFPKTCRL
LVLSDPVLCFHTLSPVSHCEGLNHFKCRSGECISMERVCDNKRDCRDWSDEPLRECGSNE
CLYNSGGCSHVCNDLKIGYECLCPTGYNLVSKKRCEDIDECANPETCSQICINQMGGYKC
DCEEGYQIDPATQACKAIGTIAYLFFTNRHEVRKMTLDKSEYTRVIPRLKNVVALDMNIA
TKEMYWSDLSLKKIYRSPVDSAEDVSHHHVVIDSDIDGPEGIAFDWVHGNLYWTDSIRKT
ISVVTADGSRRKTLFHQDLSKPRAIVVDPHSNFIYWTDWGNPAKIEKGGLNGVDRTALVT
DNIVWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGGRRTLIIDEDKLAHPLGLAVFEER
VFWTDVSNSAILSANRLTGSDIAPVAEHLSSPEDIILYHNLKQPAGRDWCQVFNGSCEFM
CLAAPKIGTHPPKYTCVCPDSMTLAGDRRTCVPAVPTPTPSLKSETSTTHPPVVPTTPSE
TTPKITQKPQVYTTTTVPAIITSTVTKPLRRTTRPTDRTSTSLPKKSSSQPEKPTILKTT
TVATVTAPDVPPKVVAALPKTTSNTAKALYFVLPLAIICLVAVGGVLLWRYYRLQNTNTI
HFHNPVYQKTTEDQVHIWRTQSLDGYTYPKRQIVSLDEEGDNPTFTEN
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccctctggtccttctcatctgtgtccttggtcacaccgtggccgaaacatgc
aaaccaacagagtataggtgcacaggccgtctgacctactgcataccaagcacctggcgc
tgtgatggagaagttgactgtgtaaatggagctgatgaaaagaactgtgctcccaagcag
tgcacagactcagagtttcactgcaggagcggccagtgcgtctcctcttccttcgtctgt
gacaaagatgtagattgtgttgatggcagcgacgaggcctcctgcccaccaatcacctgc
agctctgtgtccttccagtgcaacaacactgtttgtgttccccagctgtgggcttgcgat
ggtgacgcagactgctctgacggctcagacgagtggtctcagaactgtgacacaaggaac
ttcacccgctctcctattcaccagtgctcctcccaggaataccaatgtggcagtggggag
tgcatccacatcagctggaagtgtgatggtgatactgactgctttgatcggtcagatgaa
gcagactgtgctcattcaacatgtcatcctgatgagtttgaatgcggtgatggtacgtgc
atccatggcagccaccaatgcaaccatcagtacgactgcaaagacatgagtgatgaagtt
ggctgcgtcaatggtacacatcccttcgtctattctatcttcccaaagacctgcagactc
ttggtgctatctgatcccgtgctatgttttcataccttgtctccagtgagccactgcgag
ggtctgaaccattttaagtgtcgcagcggtgagtgtataagcatggagagagtgtgtgac
aacaagcgtgactgcagagattggtcagatgagccacttagggagtgtggctctaatgag
tgcctctacaacagtgggggctgctctcatgtttgcaacgacctgaagatcggctatgag
tgcttgtgtccaactgggtacaacttagtcagtaaaaaacggtgtgaagatatcgatgag
tgtgcaaacccagaaacctgcagccaaatctgcatcaaccagatgggtggctataaatgc
gactgtgaggaaggttatcagattgatccagcaacgcaagcttgcaaagctattggtaca
atagcctaccttttcttcaccaatcgtcatgaagtcagaaagatgaccctggacaaaagt
gaatacacaagagtaattccccgcttaaagaacgtggtggccctggatatgaacatagcc
accaaagagatgtactggtccgacctttccctgaagaaaatttacaggagtccagtggac
tcggcagaggacgtctctcatcaccatgtagtgatagatagtgacattgatggtcctgaa
ggtatagccttcgattgggtccatggcaacctgtactggaccgacagtattcggaagact
atttccgtggtaactgctgacggtagccgtcgcaaaactctcttccaccaagacttatca
aagcctcgtgccattgtggtggacccgcacagcaacttcatctactggactgactggggg
aatcctgcaaagattgagaagggaggccttaatggagtagaccgcactgctttggtcact
gacaacattgtgtggcctaatggcatcacactcgatctgctgaaccagcgcctctactgg
gtagactctaagctgcacacgctctccagtattgatgtacaaggcggtggtcggcgcacc
ctgatcatcgacgaggacaagctggctcacccattgggactcgctgtgtttgaggaaaga
gtgttctggacagatgtcagtaatagtgccatcctcagtgccaacaggctgactggtagt
gatattgcaccagtggcagaacatctttcatcccctgaggacatcattctttaccataac
ctcaaacaacctgctggaagggactggtgtcaggtgttcaacggcagctgtgaattcatg
tgcctagctgccccaaaaataggcacacatcccccaaaatatacctgtgtgtgtccagat
agtatgacgctagcaggggataggaggacatgtgtgcctgctgttccaactcctacacct
tctttaaagtctgaaacctcaactacccaccccccagttgtgcctacaacaccatcagag
accacgccaaagataacacagaagccccaggtctacactactacaacagtgcctgccata
atcaccagcacagtcacaaagccacttaggcgtaccactaggcctacggacaggaccagc
acatctttaccaaagaaatcctcgtctcagccagaaaagcctacaatcttgaagaccacc
acagttgctactgtcacagctccagacgttccaccaaaagtagttgcagctttacccaaa
actacctccaacactgcaaaagctctttactttgtcctacctctggcgatcatttgtctg
gtggctgttgggggtgtgctgctatggagatactatagactccaaaacaccaacacaatt
cactttcacaaccctgtctatcagaaaaccactgaggaccaggtgcatatttggaggacc
caaagccttgatggttacacttaccctaaaagacaaattgtgagcttggacgaagaggga
gacaatccaaccttcactgaaaactga
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