Girardinichthys multiradiatus (darkedged splitfin): 124863587
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Entry
124863587 CDS
T08099
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124863587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmu03041
]
124863587
Spliceosome [BR:
gmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124863587
Complex C
U5 SnRNP specific factors
124863587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Roc
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
124863587
NCBI-ProteinID:
XP_047213996
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All DBs
Position
X:31708473..31730434
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDDLDAEDRDIDERDEDEDDDPGDEDENVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKHKQFTLMEQELPATVYDMEFLAD
LMDGTELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSREKSYLFNIMDTPGHVNFSDEVTSSMRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
TSNSQRSFVEFILEPLYKILSQVVGDVDTTLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHVPSPQEGAKIKIEHTYTGGLDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLDDEEDSQICTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgatttatatgacgagtttggtaattacatcggtccagagctggactctgac
gacgacgaagatgacctggatgcagaggacagggacattgacgagagagatgaagatgaa
gacgatgaccctggggatgaggatgagaacgtacccggcatggaggtggtcctgcatgag
gataagaagtactatcccacagcagaggaggtttatgggccggaggtggaaactattgtc
caggaagaagacacacaacccctcactgaacccatcattaagcctgtcaagcacaagcag
tttacgctgatggagcaggagttacctgccactgtttatgacatggagtttcttgcagat
ttgatggacggtaccgagctgatccgtaacgtcaccctgtgtggtcacctccaccacggc
aagacttgttttgtggactgcctgattgagcaaacacaccctgaaatcagaaagagggac
gatgtcgacctccggtacacagacatccttttcacagagcaggagagaggggtaggcatc
aaaagcactccagtcacaatggtcctgcctgactccagagaaaaatcctaccttttcaac
atcatggatacaccaggccatgtgaacttctctgatgaggtcacttccagcatgaggatc
tcggatggtgttgtcctcttcatcgatgcagcagaaggagtgatgctgaacacagagcgt
ctgatcaaacatgcagtccaggagcgcatggccatcaccatctgcatcaacaaggtggac
cgactcatcgtggagctcaaactgccaccaacagatgcttattataaacttcgacacatc
gtggatgaggtcaatggtttgctcagcacctactccacagacgagaacttggtggtgtct
cctctcctcggaaatgtgtgcttcgccagctctcagtacagcatttgtttcactctggga
tcctttgccaagatctactcagacacctacggtgatatcaactataatgagtttgcaaag
cggctctggggagacatttatttcaaccctaaaactcgcaagttcacaaagaaagctccc
acaagtaactcccagcgcagctttgtggagtttatcctggagcctctttacaagatcctc
tcacaggtggttggagatgtggacacaacgctgcctcgggttttggatgagctcggtatt
cacctgacgaaagaagagctgaagctgaacattagaccactgcttcggctggtctgtaac
cgcttctttggagagttcaccggttttgtggacatgtgcgtgcaacacgtcccctcgcca
caagagggtgctaaaataaagatagagcacacgtacacaggaggcctggattcagacttg
ggagaggccatggcagaatgtgatcctgatggccctttgatgtgccacaccactaagatg
tacagcacagaggatggggtccaattccatgcgtttggcagggttctgagcggtaccatt
caggcaggtcagccagtgaaggtattgggagagaactacacgctggacgacgaggaagac
tctcagatctgcacagtgggccgtctctggatttctgttgccaggtaccaaattgaagtg
aatcgagttcctgcaggaaactgggttctgattgaaggctgtgaccagccaatcgtgaag
accgccaccatcacagagccacgaggaaacgaagaggctcagattttcaggccgttgaag
tttaacacggcttcggttatcaagattgccgtggagcccgttaacccgtccgagctgccg
aaaatgttggacggcctgagaaaggttaacaagagctacccttctctaaccacaaaggtg
gaggagtctggagagcatgtcatcttagggacaggagagctttacctggattgtgtcatg
cacgatttgaggaagatgtactcagagattgacattaaagtcgctgatcctgttgtgacc
ttttgtgaaacagttgtcgagacgtcatctcttaagtgttttgctgagacgcccaacaaa
aagaataagatcaccatgattgcagaacccctggagaaggggcttgccgaggacatcgag
aacgaagtggtgcagatcacgtggaacaggaagaaactgggagaattcttccagacaaag
tacgactgggatctgctggctgccaggtctatctgggcctttggaccggacacaactggg
cccaatattcttgtggatgacacacttccttcagaggtggacaaagctctgcttggttca
gtcaaagacagcatcgttcagggcttccagtggggcaccagggagggacctctttgtgat
gaacctattaggaacgtcaagtttaagatcctggatgccgtcatcgctcaggagcctctc
cacagaggaggaggtcaggtcatccccacagccaggagagtggtgtactccgcctttctt
atggccactccaaggttaatggagccatattactttgtagaggtccaggctccagctgat
tgtgtatctgcagtctacacagtcctggctagaagaaggggtcatgtcacccaggatgca
cctatacccggctctcctctctacacgatcaaggcttttatcccagccattgactctttt
ggctttgagaccgaccttcgcacgcacactcagggtcaggccttcgctctgtctgtgttt
caccactggcagattgtccccggtgaccccctggacaagagcattgtgatcaggcccctc
gagcctcaacctgcccctcacctggcccgagagttcatgatcaagaccagaagacgcaag
ggtctgagtgaagatgtgagtatcagcaagttcttcgatgatcccatgttgttggagctg
gcgaaacaggacgtggtgcttaattatcccatgtga
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