Girardinichthys multiradiatus (darkedged splitfin): 124863808
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Entry
124863808 CDS
T08099
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124863808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmu03041
]
124863808
Spliceosome [BR:
gmu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124863808
Complex C
U5 SnRNP specific factors
124863808
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Roc
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
124863808
NCBI-ProteinID:
XP_047214262
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All DBs
Position
Y:32797067..32818904
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AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDEDDLDAEDRDIDERDEDEDNDPGDEDENVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKHKQFTLMEQELPATVYDMEFLAD
LMDGTELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDVDLRYTDILFTEQERGVGI
KSTPVTMVLPDSREKSYLFNIMDTPGHVNFSDEVTSSMRISDGVVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLIVELKLPPTDAYYKLRHIVDEVNGLLSTYSTDENLVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKRLWGDIYFNPKTRKFTKKAP
TSNSQRSFVEFILEPLYKILSQVVGDVDTTLPRVLDELGIHLTKEELKLNIRPLLRLVCN
RFFGEFTGFVDMCVQHVPSPQEGAKIKIEHTYTGGLDSDLGEAMAECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLDDEEDSQICTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatttatatgacgagtttggtaattacatcggtccagagctggactctgac
gacgacgaagatgacctggatgcagaggacagggacattgacgagagagatgaagatgaa
gacaatgaccctggggatgaggatgagaacgtacccggcatggaggtggtcctgcatgag
gataagaagtactatcccacagcagaggaggtttatgggccggaggtggaaactattgtc
caggaagaagacacacaacccctcactgaacccatcattaagcctgtcaagcacaagcag
tttacgctgatggagcaggagttacctgccactgtttatgacatggagtttcttgcagat
ttgatggacggtaccgagctgatccgtaacgtcaccctgtgtggtcacctccaccacggc
aagacttgttttgtggactgcctgattgagcaaacacaccctgaaatcagaaagagggac
gatgtcgacctccggtacacagacatccttttcacagagcaggagagaggggtaggcatt
aaaagcactccagtcacaatggtcctgcctgactccagagaaaaatcctaccttttcaac
atcatggatacaccaggccatgtgaacttctctgatgaggtcacttccagcatgaggatc
tcggatggtgttgtcctcttcatcgatgcagcagaaggagtgatgctgaacacagagcgt
ctgatcaaacatgcagtccaggagcgcatggccatcaccatctgcatcaacaaggtggac
cgactcattgtggagctcaaattgccaccaacagatgcttattataaacttcgacacatc
gtggatgaggtcaatggtttgctcagcacctactccacagacgagaacttggtggtgtct
cctctcctcggaaatgtgtgctttgccagttctcagtacagcatttgtttcactctggga
tcctttgccaagatctactcagacacctatggtgatatcaactataatgagtttgcaaag
cggctctggggagacatttatttcaaccccaaaactcgcaagttcacaaagaaagctccc
acaagtaactcccagcgcagctttgtggagtttatcttggagcctctttacaagatcctc
tcacaggtggttggagatgtggacacaacgctgcctcgggttttggatgagctcggtatt
cacctgacgaaagaagagctgaagctgaacattagaccactgcttcggctggtctgtaac
cgcttctttggagagttcaccggttttgtggacatgtgcgtgcaacacgtcccctcgcca
caagagggtgctaaaataaagatagagcacacgtacacaggaggcctggattcagacttg
ggagaggccatggcagaatgtgatcctgatggccctttgatgtgccacaccactaagatg
tacagcacagaggatggggttcaattccatgcgtttggcagggttctgagcggtaccatt
caggcaggtcagccagtgaaggtgttgggagagaactacacgctggacgacgaggaagac
tctcagatctgcacagtgggccgtctctggatttctgttgccaggtaccaaattgaagtg
aatcgagttcctgcaggaaactgggttctgattgaaggctgtgaccagccaatcgtgaag
accgccaccatcacagagccacgaggaaacgaagaggctcagattttcaggccgttgaag
tttaacacggcttcggttatcaagattgccgtggagcccgttaacccgtccgagctgccg
aaaatgttggacggcctgagaaaggttaacaagagctacccttctctaaccacaaaggtg
gaggagtctggagagcatgtcatcttagggacaggagagctttacctggattgtgtcatg
cacgatttgaggaagatgtactcagagattgacattaaagtcgctgatcctgttgtgacc
ttttgtgaaacagttgtcgagacgtcatctcttaagtgttttgctgagacgcccaacaaa
aagaacaagatcaccatgattgcagaacccctggagaaggggcttgccgaggacatcgag
aacgaagtggtgcagatcacgtggaacaggaagaaactgggagaattcttccagacaaag
tacgactgggatctgctggctgccaggtctatctgggcctttggaccggacacaactggg
cccaatattcttgtggatgacacacttccttcagaggtggacaaagctctgcttggttca
gtcaaagacagcatcgttcagggcttccagtggggcaccagggagggacctctttgtgat
gaacctattaggaacgtcaagtttaagatcctggatgccgtcatcgctcaggagcctctc
cacagaggaggaggtcaggtcatccccacagccaggagagtggtgtactccgcctttctt
atggccactccaaggttaatggagccatattactttgtagaggtccaggctccagctgat
tgtgtatctgcagtctacacagtcctggctagaagaaggggtcatgtcacccaggatgca
cctatacccggctctcctctctacacaatcaaggcttttatcccagccattgactctttt
ggctttgagaccgaccttcgcacgcacactcagggtcaggccttcgctctgtctgtgttt
caccactggcagattgtccccggtgaccccctggacaagagcattgtgatcaggcccctc
gagcctcaacctgcccctcacctggcccgagagttcatgatcaagaccagaagacgcaag
ggtctgagtgaagatgtgagtatcagcaagttcttcgatgatcccatgttgttggagctg
gcgaaacaggacgtggtgcttaattatcccatgtga
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