Girardinichthys multiradiatus (darkedged splitfin): 124867022
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Entry
124867022 CDS
T08099
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03320
PPAR signaling pathway
gmu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124867022 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
124867022 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124867022 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gmu03310
]
124867022 (nr1h3)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124867022 (nr1h3)
Nuclear receptors [BR:
gmu03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
124867022 (nr1h3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
124867022
NCBI-ProteinID:
XP_047219151
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Position
4:complement(46478306..46496230)
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AA seq
461 aa
AA seq
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MSTLSVTDVGHDESKVFDGTPELQLDCMAEESSGNATMKPDGLLSLTDLSQPDDFPVPSR
NGTSLTEMSSALPVEPNDIKLDPSAADASGSVEGQPVKRKKGPAPKMLGNEVCSVCSDKA
SGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAGMLE
QCVLSEEQIRLKKLKKQQEEETARTSIVVTPSSAQEAATLDPQQQEMIEKLVAMQKQCNK
RSFLDRPKVTPWPQSQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQ
IALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGM
NDLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYITIKRPNDHLMFPR
MLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtctgtgactgatgttggtcatgatgagagtaaggtgtttgacggcacc
cctgagctgcagctggactgcatggctgaggagagcagtggaaacgccacaatgaagccc
gacggcctgctgtcactgaccgacctctcccagccagatgacttccctgtcccctcccgc
aacggcacgtcgctcactgagatgagcagcgctttgccagtggagccaaatgacattaaa
ctggatccatcagcagccgacgcgtctggtagcgtagaagggcagccagtgaagagaaaa
aaggggccggctccgaagatgctgggaaacgaggtgtgcagtgtctgcagcgacaaagct
tctggtttccactacaatgtgctgagctgcgagggctgcaagggcttcttccgccgcagc
gtcattaaaagcgcccagtactcgtgcaagaacaatggccgctgtgaaatggacatgtac
atgcgccgtaagtgccagcagtgccgcctgcgcaagtgtcgggaggcaggcatgctggaa
caatgtgttctttctgaggagcaaatccgattgaaaaagctgaaaaagcagcaggaggag
gaaacggcacgtacctccatagtagtcacaccaagctctgcacaggaagcagccacactc
gatccccagcagcaggagatgattgagaagctggtggctatgcagaaacaatgcaacaag
aggtccttccttgaccgaccaaaggttacgccatggccacagagtcaagacttgcagaac
cgagaagtgcgacagcaacggttcgcccattttacagagctcgcaataatgtcagtccag
gagattgtggatttcgcaaagcagcttcctggtttccttgagttgacgagagaagaccag
atcgctctactaaaaacgtctaccattgagattatgcttctagagacatcacgccgatac
aatcctgctattgatagcatcacatttctcaaagatttcagctataataaagaggatttt
gccaaagcagggcttcagtttgagttcattaaccccatctttgagttttcaaaaggaatg
aacgacctgcaccttgatgaggccgaatacgctctgctcattgctatcaacatcttttca
gcagatcggccaaatgtgcaggatcacgatctggttgagaggctgcagcagccctatgtg
gacgctctgcgctcttacatcacaataaagagaccaaatgaccacctgatgttcccccgt
atgctgatgaagctggtgagccttcgcacattgagcagtgtccactcggagcaggttttt
gccctccgcctacaggataagaagcttcctccgctgctgtctgaaatctgggatgtcaat
gagtga
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