Girardinichthys multiradiatus (darkedged splitfin): 124867625
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Entry
124867625 CDS
T08099
Symbol
cacna1fa
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04010
MAPK signaling pathway
gmu04020
Calcium signaling pathway
gmu04260
Cardiac muscle contraction
gmu04261
Adrenergic signaling in cardiomyocytes
gmu04270
Vascular smooth muscle contraction
gmu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124867625 (cacna1fa)
04020 Calcium signaling pathway
124867625 (cacna1fa)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
124867625 (cacna1fa)
09153 Circulatory system
04260 Cardiac muscle contraction
124867625 (cacna1fa)
04261 Adrenergic signaling in cardiomyocytes
124867625 (cacna1fa)
04270 Vascular smooth muscle contraction
124867625 (cacna1fa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124867625 (cacna1fa)
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124867625 (cacna1fa)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
FAM176
Glyco_hydro_cc
Motif
Other DBs
NCBI-GeneID:
124867625
NCBI-ProteinID:
XP_047220125
LinkDB
All DBs
Position
1:38387448..38436097
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AA seq
2113 aa
AA seq
DB search
MDGAKKDALPVDDVGKSDTLGSTGSARKRGGGAKKAMQANKSALRAPRALCCLTLSNPIR
MAALALVEWKYPFFQPFDIFILLAIFANCVAMGVTKPYPDDDSNRTNHQLERVEYVFLVI
FTIETFTKILAYGLVMHPSAYIRSGWNLLDFVIVIVGLFSVMAEGMTDHKPGEAHHAAGK
PGGLDVKALRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIGMLVMFVIIIYAIIGL
ELFLGRMHKTCFDTSTGLMVEDDPSPCAFAGVGRLCVTNGTECKGKWEGPNGGITNFDNI
FFAMLTVFQCITMEGWTDVLYWMNDAIGHDIPWVYFVSLVIFGSFFIINLVLGVLSGEFS
KEREKAVARGELQKAQESKQMEEDMIGYMDWLIEAEDVDEEGNKRAAIAKKKMMKKFGWY
KHSEDGGESDSDDDIAYLDDDHGFCASLMARMMANSFCDQLCQLNHTMRKNCRVAAKTAN
FYWLVLLLVFLNTVASASEHYGQPTWLTEMQERANKILLLLFTLEMLMKMYAFGLQIYFM
ALFNRFDCFVVCGGILETLLVEMDVIPPIGIAVLRCIRLLRIFKMTRHWAALSDLVTSLL
NSMKAICSLLLLLFLFLIIFALLGMQLFGGKFNFDETQMKRSTFDSFPQALLTCFQILTG
EDWNAVMYDGIMAYGGPIFPNMVVCIYFVILFVCGNYILLNVFLAIAVDNLAGGGEKKTV
EEKKEEEEEWDEDEEKEDEDAGNEEDDWQENEELRAIEGLEGVAPLKPEFSGPKEKIVPI
PDGSSFFILGKKNCLRVACHNLIHHPYFTNFILIFIILSSISLAAEDPIKSHSFRNIVLG
YADYVFTSVFTVEIILKVTADRIKLNKPEPKKAXELTLCLCSFFLVXMTVYGAFLHTGSF
CRNAFNLLDLLVVSVSLTSFFLHSSAISVVKILRVLRVLRPLRAINRAKGLKNVVQCVFV
AIRTIGNILIVTTLLQFMFACIGVQLFKGRFYSCTDEAKHTPDECKGTFVVYKDGDMNHP
MVRERIWENSDFNFDNVLMGMLALFTVSTFEGWPQLLYRAVDANAINRGPIYNYRVEISI
FFIIYIIIIAFFMMNIFVGFVIITFREQGEAEFKNCELNKNQRQCVYYALKAQPIKIYIP
KNPSQLKFWKVINSSQFEYIMFVLILGNTLTLAIQHYEQSKLFTSIMDILNMIFTVVFTI
EMVIKLMALRAHHYFIDPWNSFDALIVVGSVLDIAVSEFSGGGGHGEGGGKGESGKVSIT
FFRLFRVLRLVKLLSKGEGIRTLLWTFVKSLQALPYVGLLIAMIFFIYAVIGMQMFGKIA
VDDDTDINRNCNFQTFFMAVLVLFRCATGEQWQQIMLGALPGRRCDPESDVEPGEEFTCG
SNLAYLYFISFFMLCAYLIINLFIAVIMDNFEYLTRDWTVLGTHHLDEFKRVWSDYDPEA
TGRIKHIDVVTMLRRIQPPLGFGKLCPHRVACKRLVAMNVPLHPDGTVTFNATLFALVRT
SLKIKTEGPVDKQNEELKIIIKKLWKHTKPKLIDEIIPPPRGDEVTCGKFYASFLIQDYF
KKYRKRKERERKSKKKDKAAALQQGLRTLRDLAPEMRLAMACDLEEEEATEGEMTGDEVF
DSEHGTSANPTPASTPMPPLDMLVEQTAVIIEPMPRVANGDVITKQVEALQEHLRPGSEL
AGFTVVTEQPGRSEPLPISESPLPPPPPEISAEEDFLLKDALVPTQSEAPEQFYKREAYA
THLTSIDGFEYPEAVSPVPTETGDNGQTFDRDSSIGEIPYGAPDPNGFIGSENNMNGGST
AVSPTPYDTNGYNRNGYTGYNVNGIILGTNDNGSTVGGCNEYGSTFSGYNGNSGYNGNGY
NGNGYNGNSGYNGNGFNENQNSGAQFVRRRLLPAIPKGRKPAFNFQCLKPQTSVDNLPIP
GNYHGNTSPTRSRLQNQHNLDSRPSSVSSMSSTSWANTAAAGATPLPGIIAPAGRRGKLI
YTPMILVDQESGASQPLWSDGSASLPAGKRPGWYPGQTRTFTSMRMQPSVNQGLIDKGSA
DSLVESILISEGLGIYARDPKFVSFAKREIAEACHMSLDEMETAAADLIVRGASHLSQFE
NELADEMNCVISY
NT seq
6342 nt
NT seq
+upstream
nt +downstream
nt
atggacggagcaaagaaagatgccctaccagtggacgatgtgggcaaatcagacaccctc
ggttcaactggctcagccagaaaacggggagggggggccaaaaaggcgatgcaggccaac
aagtctgccctcagggccccccgagccctctgctgcctcactttaagcaaccccatccgc
atggcggcactggccctggtggagtggaaatatcctttttttcagccttttgatatcttc
attcttctagctatttttgccaactgtgtggccatgggggtcacaaagccatatccggat
gatgattccaaccgtaccaaccaccagcttgaaagagttgaatatgtcttcctcgtcatc
ttcaccattgagaccttcaccaagattcttgcctatggtttagtcatgcaccccagcgcc
tacatacgcagcggctggaacctgctggatttcgttattgtcatcgtcgggttgttcagt
gtgatggcggagggcatgacggatcataagcccggagaggcccaccatgctgcaggaaaa
cctggaggtctggatgtgaaagctctcagagccttcagggtgctgcgacctcttcggctt
gtatctggcgtgccgagtttacagattgtgttgaactccatcatgaaggccatggtccca
ctgctccacatcggcatgcttgtcatgtttgtcatcataatctacgccatcattggtttg
gagcttttccttggcaggatgcacaagacgtgctttgacaccagcacaggtctcatggtg
gaggacgatccgtcaccgtgtgcttttgcaggggtcggccgcttatgtgtcaccaatggg
actgaatgcaagggaaagtgggagggaccaaatggtggcatcacgaactttgacaacatt
ttctttgccatgctcacagttttccagtgcatcactatggagggttggacagatgtgctc
tactggatgaacgacgccattggacatgatattccatgggtttactttgtttctttagtc
atcttcggatcatttttcatcatcaacctcgttttgggtgtattgagcggagagttctct
aaagaaagagagaaggccgtcgcacgtggagagctgcagaaagctcaggagagcaagcag
atggaggaggacatgattggctacatggactggcttatagaagccgaggatgtggatgaa
gaaggaaacaaacgtgctgcaattgcaaagaaaaagatgatgaaaaagtttggttggtac
aaacacagcgaggatggaggagagtcggactctgatgatgacatcgcatacctcgacgat
gatcatggtttctgtgcttctctcatggcgaggatgatggccaatagcttctgtgaccag
ttgtgccagctgaaccatacaatgagaaaaaactgccgcgttgcagcgaagaccgcaaac
ttctactggttggtgctgctgctggtgtttctcaacacggtggccagcgcctcggagcat
tacggtcagcccacatggctcacagaaatgcaggagcgagccaataagatcctgctgctg
ctcttcaccttggagatgttgatgaagatgtatgcctttggtcttcagatctacttcatg
gccctgttcaaccgcttcgactgcttcgtggtgtgtggcggcattctcgagacgctgctt
gtagagatggatgtcatcccacctattggcatcgctgtgctgcgctgcatccgactgctc
aggattttcaagatgacccggcactgggctgccctctccgatctggtcacctcactgctc
aactccatgaaagctatctgctccctcctactgctgctcttcctcttcctcatcatcttc
gccttgctggggatgcagttgtttggagggaagttcaactttgatgagactcagatgaag
agaagcacatttgactccttccctcaggctctgttaacatgtttccagattctcaccgga
gaggactggaacgccgtgatgtacgatggcatcatggcatatggagggccaatcttccct
aacatggtggtttgcatttacttcgtcatcctcttcgtctgtggtaactacatcctgctc
aatgtcttcttggctattgctgtggataacttggcaggaggtggtgaaaagaaaacagta
gaggaaaaaaaggaagaagaagaggagtgggatgaggacgaggagaaggaggacgaagat
gcagggaatgaggaggatgactggcaggaaaacgaggagctgagagccattgagggtctg
gagggtgttgcaccattaaagccagagttctctggccccaaagagaagatcgtgccaata
cccgacggaagctccttcttcattcttggaaagaaaaactgtttacgagttgcctgccac
aacctcattcaccacccctacttcaccaacttcatcctcatcttcatcatccttagcagc
atctcacttgctgccgaggatcccatcaaatcccactcattcaggaacatcgtgctcgga
tacgccgattatgtcttcacttcagttttcacggtggagatcatcctgaaggtaacagct
gacagaattaaactgaacaaaccagagcctaaaaaagcanntgagctaaccttgtgtcta
tgctccttctttctcgtctagatgacggtttatggagcttttcttcacaccggctccttc
tgcagaaacgcctttaacctccttgacctgcttgttgtcagtgtgtcgctcacgtctttc
ttcttgcattctagtgcgatctccgtggtaaagattctccgagttctccgagtgctcagg
cctctccgagccattaatcgagccaaaggactgaagaatgtggtgcagtgtgtctttgtg
gcgattcgcaccatcggcaacatcttgattgtcacgactctccttcagttcatgtttgct
tgtattggagttcagcttttcaagggcagattctacagctgcacagatgaggctaaacac
accccagacgagtgcaagggaacgtttgtggtgtataaagacggggacatgaaccacccc
atggtcagagagaggatctgggaaaacagtgacttcaactttgacaatgtgctgatggga
atgttggctttgtttactgtatcaacgtttgaaggttggcctcagctcctgtaccgcgca
gtggacgccaacgccataaaccgaggccctatttacaactaccgagtcgagatctccatc
tttttcatcatctacatcatcatcatcgctttcttcatgatgaacatattcgttggtttt
gtcatcattacttttcgagagcaaggagaggctgagtttaaaaactgtgaacttaacaag
aatcaaaggcagtgtgtgtattatgcactgaaagctcagccaataaagatttacatccca
aaaaacccatcccagctgaagttctggaaagtcatcaactccagccagtttgaatatatc
atgtttgtgttgattttgggaaacaccctcactctggctattcagcattatgagcagtcg
aaactattcacctccatcatggacattctcaacatgatcttcaccgtggttttcacgata
gagatggtcatcaagctgatggctcttcgcgctcatcattattttatcgatccctggaat
tcattcgacgcgctgatcgttgtaggcagcgtcttggacattgcagtgtctgaatttagt
ggcggaggcggccacggagagggtggtgggaaaggagaaagcggaaaagtgtccatcacg
ttcttccgtttgttccgagtgttgaggttggtcaagctgctcagcaaaggagagggcatt
cgaactcttctctggacttttgtcaaatccttgcaggctttgccttacgttggcctcctc
atcgctatgatcttcttcatctacgctgtgattggcatgcaaatgtttgggaaaatagct
gtcgatgacgacacagacatcaacagaaactgcaacttccagacgttcttcatggcggtt
ctggttctttttaggtgtgccactggagagcagtggcagcagatcatgctgggcgccctg
cctggcagacgctgtgacccagagtctgacgttgagcccggtgaagagttcacctgcggg
agcaacttggcctacctttacttcatcagcttcttcatgctctgcgcttatctgatcatc
aacttgttcattgctgtcatcatggacaactttgaatatcttacaagagactggacagtg
ttggggactcaccacctggacgagtttaagagagtttggtctgactacgatccagaagcc
acaggtcgcatcaagcacatcgacgtagtcactatgttgcgcaggattcagccacctctt
ggctttggaaagctgtgccctcatcgtgttgcttgcaaaagactggtggctatgaatgtg
ccccttcaccctgatgggactgtcactttcaacgccactctgtttgctcttgtccgaact
tcactcaagatcaagactgaaggccctgttgataagcagaatgaggagctgaagattatc
attaagaagctgtggaagcacacgaagcctaaactcattgatgaaatcattccgccccct
agaggggacgaggtgacttgtggaaagttttatgccagtttcctgattcaagactacttc
aaaaagtacagaaagagaaaagagagagaaagaaaatccaagaagaaggacaaggctgct
gcactgcagcaagggctgcggacgctgcgggatctggctccagagatgcgtctggcgatg
gcttgtgacctagaggaagaagaggccacagaaggagagatgacaggcgatgaggtattt
gacagcgagcacgggacctctgcaaaccccacgcctgccagcactccgatgccgcccctg
gacatgctggtggagcagacagctgtgatcatcgaacccatgcctagggtcgccaatgga
gatgtgatcaccaagcaggtggaggccttgcaggagcacctgagaccaggatcagagctg
gcaggtttcacagttgttacagagcaacctggaaggtccgaaccccttcccatcagcgaa
tcgcctcttcctccgcctccaccagagatatcagcagaagaagactttctcctcaaagat
gcactcgttccaactcaaagtgaagcacctgaacagttttacaagcgtgaggcatatgct
acacatttaacatcaatagatgggtttgagtatccagaggcagtttctcctgtaccaact
gagacaggagacaatggtcagacttttgacagagatagcagcataggagaaataccctat
ggagctcctgaccccaatggcttcatcggcagtgaaaacaacatgaacggagggagcacc
gctgtcagccccactccctatgacacaaacggatataacagaaatggatacacaggctac
aatgtgaacggcatcatcctcggcaccaacgacaatggaagtaccgtaggtggctgcaat
gaatacggcagcaccttcagcggttacaatggaaacagtggttacaatgggaatggttac
aatgggaacggctacaatgggaacagtggttacaatgggaatggcttcaatgaaaatcaa
aacagtggagcccagtttgtccggagacggctgcttcctgccataccaaaaggtcggaag
cctgcatttaacttccagtgtctaaagcctcagaccagtgtggacaatctccccattcct
ggaaactatcatgggaacacgtcaccaaccagatcccgcctgcagaaccagcacaacctg
gactcccggcccagcagtgtgtcgtccatgtcttccacctcgtgggccaacacagcagca
gctggtgccacaccccttccaggaataattgcccccgcagggcgtcgaggcaagctcatt
tacacccccatgatcctggtggatcaagaaagtggtgctagtcagccactctggagtgac
ggctctgccagtctccctgcaggaaaacgtccaggctggtaccctggtcagacaaggacc
ttcaccagcatgaggatgcaaccttctgttaaccagggcctcatagataaaggcagcgca
gacagtctggttgaatcaatcttgatctctgagggcctaggcatctacgccagggatccg
aaatttgtaagctttgccaagcgggagattgccgaagcgtgtcacatgagcttggacgaa
atggagactgcggctgccgacctgatagtgcgaggagccagtcatctgtcccagtttgag
aacgaactggcagatgaaatgaactgcgtgatttcttactga
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