Girardinichthys multiradiatus (darkedged splitfin): 124867826
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Entry
124867826 CDS
T08099
Name
(RefSeq) slit homolog 1 protein-like
KO
K06838
slit 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124867826
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Heparan sulfate / Heparin
Axon guidance molecules
124867826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRR_1
LRRCT
LRR_14
LRR_9
hEGF
LRRNT
EGF_TEN
EGF_Teneurin
EGF_CA
EGF_DL_JAG
EGF_MSP1_1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
124867826
NCBI-ProteinID:
XP_047220420
LinkDB
All DBs
Position
5:4884573..4981699
Genome browser
AA seq
1565 aa
AA seq
DB search
MPAGTRKDGVRSAGCRRMAVAVSPGLWTMLAWAVLVGQGGVEACPAPCSCLGNTVACNGR
GIHSVPKNIPRGTERLDLNENNLTVITKTDFSGLKHLRALHLMGNQISNIERGAFDELKE
LERLRLNRNHLSQLPELLFQKNEALSRLDLSENTIQAIPRRAFRGATDLKNLQLDKNHIG
CIEEGAFRALRSLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNALRCDCHLAWLSPWL
RQRSALGLYTQCSSPPALRGLNVAELRKSDFACSGHSGSAFVQPCSLASGSCPPMCSCSN
NIINCRGRGLTAIPAHLPEAMTEIRLEQNGIKSVPPGAFTSYKKLRRIDLSNNQISEIAP
DAFHGLRALNSLVLYGNKITELPSGVFDGLVSLELLLLNANKIHCIRATAFKDLENLALL
SLYDNKIQSLAKGTFGSLHSIQTLHLAQNPFVCDCHVKWLADFLSSNPIETSGARCASPR
RLANKRIAQIKSHKFRCSTKEQYHIPGTDDRRLSYECNSKPVCPAKCRCEANVVDCSNLR
LTKFPEHLPPSTEELRLNNNDLSMLEATGTFKGLPHLKKINLSNNKISEIEDSAFEGASS
VVELHLTANHLDSARGSMFKGMEGLRMLMLRNNRITCIHNSSFTGLTNVRLLSLYDNQLT
TILPGAFDTLPNLSTLNLLANPFNCDCHLSWFGAWLRSRRIVTGNPRCQSPAFLRGIPLQ
DVAVPDFRCEDGSVLEDRSCLAGPQCPSQCSCMDTVVRCSNKHLQALPRGLPRNITELYL
DGNQFTSVPKELATFKYLQLVDLSNNKISSLSNDSFSNMSQLTTLILSYNSLQCIPPLAL
AGLRSLRLLSLHGNDISKLQQGIFNDLATLSHLAIGANPLYCDCRLLWLSDWVKSGYKEP
GIARCTGPQGMEGKLLLTTPADKFQCLGPVDMTVQAKCSPCVSSPCQNQGTCHIHQTQQY
TCACNTGFTGKHCETPIDACVSNPCTNGGTCLRDEQTGGFSCACTFGFHGTFCEVNVDDC
EDHGCDNGATCVDGVGNYTCLCRPSYRGLFCEEEDDICSSGRNPCKHQSTCISSPTGPRC
VCLPGWVGPDCSIDYNECVDHHCQNAAQCVDHLDGYSCVCPQGFSGTFCEVPDLQLTPCH
LAKCKNGAACEDKLGTAICQCLPGFEGQGCEKLVSVNFVDRDSYVQLQDVKNWPQSNITL
QVSTAEDNGILLYNGDHEPIAVELHQGRVRVTYDPGNQPASAIYSAETVNDGLFHTVELV
TFNQMVNLSVDGGEPTTLDSHGRGQLVTGETPLYVGGMPEEVIPTSRGLSSQTLNTSSFH
GCIRNLYINHELQDFTRSQMKTGIVPGCQPCRKLYCLHGICQPNSAQGPQCHCQPGWTGQ
HCDQPITVGLSGVDVVTMANGINPCEGNKCVKGECIVLDAQTYRCECEKGYRGTLCNLKE
EPAGSCQRLQCLHGQCQKTEDGESCVCEQGQTGESCNIETPCRGEPVRDYHQLQRGTVLC
QTSKPFSWVQCQGHCRAEAKRDVAAASCCAPLRVRRRRITFECDDGTSFTQDVEKPVECG
CKECL
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagggacaagaaaggatggagtcaggtcagcaggctgtaggaggatggcagtg
gcagtcagcccgggtctgtggacaatgctggcgtgggctgtcctggtgggtcagggaggt
gtcgaagcatgtcccgctccctgcagctgcctggggaacacggtggcctgcaacggccgg
ggaatccactctgttcccaaaaacattcccagagggacagagaggctagatctgaacgag
aacaacctgactgtcataactaagacagatttctctggtcttaaacacctcagagctctt
cacctgatgggaaaccagattagtaacattgaaaggggagcctttgatgagctaaaggag
ctggagagacttcgtcttaaccgaaatcatctcagccagcttccagagctgctctttcag
aagaatgaagctttgtcccgactggatctgagtgaaaataccatccaggccatcccgagg
cgagctttcagaggagccacagacctaaaaaaccttcagctggataaaaaccacatcggc
tgtattgaggagggagcgttcagagctctgcgatccttggaagtgctcacactgaacaac
aacaacatcagcagcatcccagtttccagtttcaaccacatgccaaaactccgtaccttt
cgtctccactctaatgctctgcgttgtgattgtcacctggcctggctgtctccatggcta
cgacagcgatctgcgttgggcctctacactcagtgcagttccccccctgctctgcggggc
ctcaatgttgcagagctgcgtaagagtgactttgcctgctcaggccacagtggcagcgcc
tttgttcagccatgcagtttggcgtccgggtcctgtcctcctatgtgttcctgtagcaac
aacatcatcaactgtcgaggaaggggcctcaccgctatacctgcccaccttccagaggcc
atgaccgaaattcgtttggaacagaatgggatcaagtcagttcctccaggtgccttcacc
tcctacaagaaactccgccgaatagacctgagcaataaccagatatctgagattgctcct
gatgcatttcacggcctccgagctctcaactcactggttctgtatgggaataaaattact
gagttacccagtggagtatttgatggcttggtttctttggagctgctattgctgaatgca
aataaaatccactgtatccgtgccacagcattcaaagacctggaaaacctggcccttcta
tctctatatgacaacaagatacagagtctggctaagggaaccttcggctcactgcacagt
atccagacactccacctggcccagaacccctttgtttgtgactgtcatgtgaagtggctg
gctgacttcttgagttcaaaccccatagaaaccagtggagctcgctgtgccagccctcgc
cgcctcgccaacaaacgcattgctcagatcaagagccacaagttcagatgctccaccaag
gaacagtaccacatcccaggtactgacgaccgacgcctgagctatgagtgtaacagtaag
cctgtatgtcctgctaaatgtcggtgtgaggccaatgtggtggattgctccaatctacgc
ctcacgaaattccctgaacacctgccaccatccactgaagagctgcgtcttaacaacaat
gatctgtccatgctagaggccactggaaccttcaaaggtctaccacatctaaagaaaatt
aacctgagcaacaacaagatttcagagattgaggacagtgcgtttgagggcgcctcttca
gtggtggagcttcacctcacagccaaccacctggattctgcacgagggagtatgtttaaa
ggcatggagggcctgcgcatgctgatgctgaggaacaacaggattacctgcatccataac
agcagcttcacagggctgaccaacgtcaggctgctctccctctatgacaaccagcttaca
accatcctacctggggcctttgacacactgcccaacctgtccacactaaacctcctggcc
aatccgtttaactgtgactgccacctgtcctggttcggggcgtggctcagaagccgtcgg
attgtgacagggaatcctcggtgtcagagccccgcttttcttcgagggattcctctgcag
gacgtagctgtgcctgatttccgctgcgaggatggttctgtgctggaggacaggagctgt
cttgcagggcctcagtgtcccagccagtgttcctgtatggacacagtggttcggtgcagc
aacaaacatttgcaggctctgcccagaggactgccccgtaacatcaccgaactgtacctg
gatgggaaccagttcaccagtgttcctaaggagttagccacctttaagtacctgcaactt
gtagatctgagcaacaataaaattagctcactgtccaacgactccttctccaatatgagc
caactcacaactctgatcctcagttacaattcattacagtgtatccctcctctggctctg
gctggcttgcgctccctgaggctgctctctctccatggcaacgacatctcaaagctgcag
cagggaatcttcaatgacctagccaccctgtctcacctagcaattggagccaaccctttg
tactgtgactgtcggctgctctggctatcagactgggtgaagagtgggtataaggagcct
ggtattgcccgctgcactggcccccagggcatggaggggaagctgctgctcaccacacct
gctgacaagttccaatgtctgggtccagtggacatgacggttcaggccaaatgcagtcca
tgtgtgtcctccccttgccagaaccagggaacctgccacatccaccaaacccaacagtac
acctgtgcctgcaacacaggctttacgggtaaacactgtgagaccccaattgatgcttgt
gtcagcaacccctgcaccaatggaggaacttgcctaagagacgagcagacaggaggcttc
agctgcgcatgtacatttgggttccatggcacattttgcgaggtcaacgtggacgactgc
gaggatcacggatgtgacaatggtgccacctgtgttgatggagttggcaactacacctgc
ttgtgtcgtcctagctacagaggtctgttttgtgaagaggaggatgatatttgctcttca
gggagaaatccttgtaagcatcagtccacctgcatcagcagccctacaggccccaggtgt
gtatgcctcccaggttgggtgggaccagactgcagcatagactacaatgagtgtgtggat
catcattgtcagaacgcagcccagtgtgtcgaccacctggatggctacagctgtgtctgc
ccacagggattcagtggcacgttttgtgaggtcccagatcttcagctgacaccctgccac
ctggccaagtgtaagaatggcgccgcctgtgaagacaagttggggactgcaatctgtcag
tgtctgcccggctttgagggccagggttgtgagaagctggtcagcgttaactttgtcgac
agagattcttatgtccaacttcaagatgtgaaaaactggcctcagtctaacatcacattg
caggtgtcaactgcagaagataacggcatcttgctctataatggagaccatgagccaatc
gctgtagagctccatcagggccgtgtaagagtcacctatgaccctgggaaccagcctgcc
tctgctatttacagtgcggagacagtgaacgatgggcttttccacacggttgagctggtg
acctttaatcagatggtgaacttatctgtggatggaggagagccaacaactctggacagt
catggccgcggccagctggtgactggagagacaccactgtatgtgggaggtatgcccgag
gaggttataccaacttctagagggctctcttctcagaccctcaacacatccagtttccat
ggatgcatcaggaacctctacataaaccatgagctgcaagattttacccgcagccaaatg
aaaacagggatagtgccaggctgccaaccctgccgcaaactttactgcttgcatggcata
tgccaacctaatagtgcacagggtccccagtgtcactgccagccaggttggacaggacaa
cactgtgaccagccaatcactgtaggccttagtggagtggatgttgtcaccatggcaaat
ggtatcaacccatgtgagggcaacaagtgtgtaaagggtgagtgcattgtgttggatgct
caaacctatcgctgtgaatgtgaaaagggatacagaggtacgctgtgtaaccttaaggag
gagcctgcaggttcttgccagaggctgcagtgtctgcatggccagtgtcaaaagacagag
gatggagagagctgtgtttgtgagcagggacaaactggagagagctgcaatatagagacc
ccatgtagaggtgagccagttagagactaccaccaactgcagcgtggcactgttctctgc
cagacatcaaaaccgttctcctgggttcaatgtcagggtcactgccgagctgaagccaag
cgggatgtcgccgctgcctcctgctgcgcccctctgagggtccggcggcggcggattacc
ttcgaatgcgacgacgggacctcgtttacacaggatgtggaaaagcctgtggaatgtggc
tgcaaggagtgtttgtag
DBGET
integrated database retrieval system
