Girardinichthys multiradiatus (darkedged splitfin): 124868500
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Entry
124868500 CDS
T08099
Symbol
smcr8b
Name
(RefSeq) guanine nucleotide exchange protein smcr8b
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124868500 (smcr8b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124868500 (smcr8b)
Membrane trafficking [BR:
gmu04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
124868500 (smcr8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
124868500
NCBI-ProteinID:
XP_047221821
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All DBs
Position
5:40770660..40788861
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AA seq
906 aa
AA seq
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MIGSPDLLPFTGCSGFDEQGEEPEAQNLPEEFCVPLLPPSNPWTTAAQFHRDFILVAEFS
EQVGPKPVLTIPNDPKVIGSFDLNHFSVRLMSVDYQASGPGHTPPASPGLRLNFIEDSRV
ILGDSAEDTFAYVHYLTLYDLEARGMVRPFCMAYVCSDQIKLIENFSELSEYFSQASDSL
KTGNRQAFSTELQRKLQDLEYRRWTLKQETDLQKMTNGFTEVKGQADELEALETSILNHR
ELLRQVTSYPNRKLKQPDFLPYDTADSLTDLTVFVPSEPSSPSLPTSTSTSYRSEQPLKP
LEELCNYYFLSLMKNQLMDTEHRLRGDRSVLWTSRVTQSLSRRLKLTNFLFELCYPVDAE
EDEEEEEDLKRVSGSKRGAVEGQSEKDGVESFSCVEEIPIKMEAGDGGRATPDISAASEM
MGSMSSSDSIEVLGTEKSYYTQQGVAVSDSRETPVGLTDICLRRAAVDPSVRRVPAYAKR
ANSEDSIEVLSTTESIFPDDLTAITEEEAENHSLINGFEDEEELQVGCKSDEVLKEEKVM
NSAAIEKESEEPGRRKDPFEEIMVSVGFPVKDDSLTEKINKVHKDAPSDKINKLLQAKET
TELRPKTVRPVLDLHVKMAPPLAPVEVGLGSPPCAPLRLLSIDEVSDCTSFTSNSEPPSP
TTVNLTKTRTDKRRRRRRAGLRALRFIKQLSFSQHAIFCLLSGRPLVVIGGNERLVRKLV
DGLRLFLPGPGPDGSAVMSCLTTPLQVTDLLTWRLIGIHRLSSSASSAIIESLTQYSRYI
ALLDLDQRTLRCPSYSGSLVNVLADPHTGISRGTTYLLHLESCLTALANQVLLHTFVATS
PRPKPTVGHIGTEKASQCAPGHGSSENDFRVMHFLSDLITQRHVGLPPVFRFSYSSVRLH
RNTYPT
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggtcaccggacctgctgccgttcaccggctgcagtgggtttgacgagcaggga
gaggaaccggaggctcagaacctgcctgaagagttctgtgtccctcttttacctccttct
aacccctggaccacagcagcccagtttcaccgggactttatactggtggctgaattctca
gagcaggttggtcctaagccggttctgacaataccaaatgacccaaaggtcattggctct
ttcgacctcaaccacttctccgtccgtctcatgtccgtggactaccaggcgtctggaccg
ggccacacaccccctgcttcacccgggctccgactgaacttcattgaggactccagggtg
atcctgggagattcagcagaggacacctttgcatacgttcactacctgaccttatacgac
ctggaggctcggggtatggtgcgacctttctgcatggcttacgtctgttcggaccagatt
aagctgattgagaacttttccgagctgtcggagtatttttctcaggcctctgacagcctg
aagaccggaaacagacaagcgttctccacagagctgcaaaggaagctgcaggatcttgag
tacagacgatggaccctgaagcaggaaacagatctccagaagatgacaaacgggttcaca
gaagtaaaagggcaagctgatgagctggaagctttagagacttcaatcctaaaccaccga
gagctccttcgtcaggtcacatcttacccaaataggaagctcaaacagcctgacttcctg
ccctacgacacagctgactccctcacagacctgactgtgtttgtgccttctgagccatcg
tctccctcccttcccacctccacctccacctcctacaggtctgagcagcctctaaagcct
ctagaggagctctgcaactactactttctgtccctgatgaaaaaccaactcatggacacg
gagcatcgtctgcgtggcgacaggagcgtcttgtggacttctcgtgtcacacagtcactg
tccaggaggctaaaacttacaaacttcctgtttgagctgtgctaccctgtggatgctgag
gaggacgaagaggaggaagaggatttaaagagggtctcgggaagcaagaggggggctgtg
gaaggtcaatcagaaaaggatggtgtggagtcattctcttgtgtggaagagataccgata
aagatggaggcaggagatggtgggagggcgacccctgatatcagtgcagcatcagagatg
atggggagcatgagcagcagcgacagcattgaagtgctcgggactgaaaagtcatattac
actcaacagggagttgctgtgtctgacagcagagaaacaccagtggggttgacagacatt
tgtctccggcgtgcagcagtggacccaagcgttcgccgcgtgccagcctacgccaaacgt
gccaacagcgaggacagcatcgaagtactcagcaccactgagtccatcttccctgacgac
ctaactgccatcacagaggaagaagcggagaatcattccctgattaatggatttgaggac
gaagaagaattgcaggttgggtgcaagtctgatgaagtcctgaaagaggaaaaggtgatg
aactctgctgccatagagaaggaaagtgaagaacctggcagaaggaaagatccatttgag
gaaataatggtcagtgttggttttccagtcaaggacgattcactgacagagaagataaac
aaagtccataaagatgctccctcagacaagataaataaactgctccaagctaaagaaact
acggagttgaggccaaagacggtgaggccggtgcttgatctccacgttaaaatggctcct
ccccttgccccggtggaggttggtctgggctctccaccctgtgcccctctgaggctgctc
agtatagacgaagtgtccgactgcaccagcttcaccagcaactcagagccaccatctccc
actacggtaaatctcaccaaaacacgcacagacaagaggaggaggagaagaagggctgga
ctccgagccctcaggttcatcaagcagctctcgttctcccagcatgccatcttctgtctg
ctgagtggccgcccgctggtcgtcattggaggaaatgaacggttggtgaggaagctggtg
gatggtttaaggctcttcctaccaggtcctggtcctgatgggagcgctgtgatgtcatgt
ctgaccacaccccttcaagtgactgacctgctcacctggaggctcataggaatacacaga
ctatcttccagtgcatcgtctgccattattgagtctctaactcaatacagtcgctacatc
gctctgctggacctcgatcagaggacactgcgctgtccttcatattctggatccctcgtc
aacgtcctggctgatcctcacaccggcatcagccgaggcaccacctacttgctgcacctg
gagagctgtctgactgcactggccaaccaggtgctgctgcacacctttgtagccacttcc
ccacgtccaaaacccactgtgggacatattggtacggaaaaggcttcccagtgtgctcca
ggacacggcagcagtgaaaatgattttagagtgatgcactttctgtctgacctcatcacg
cagcgccacgtcggactaccgccggttttcaggttttcttacagctcagtgcggcttcac
agaaacacatatccaacataa
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