Girardinichthys multiradiatus (darkedged splitfin): 124871919
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Entry
124871919 CDS
T08099
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04081
Hormone signaling
gmu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
124871919 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124871919 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124871919 (rapgef4a)
Membrane trafficking [BR:
gmu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
124871919 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
PDC10_C
RA
Motif
Other DBs
NCBI-GeneID:
124871919
NCBI-ProteinID:
XP_047227496
LinkDB
All DBs
Position
7:26455687..26518861
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AA seq
1019 aa
AA seq
DB search
MVAAHTSSHASESAEWIICLDKRPAERSGEDVDIILARLKNVKALERFHPRLLQQICLCG
FYECLEKGVTLFRQGDIGTSWYAVLSGSLDVKVSETSSYQDAVTICTLGTGTAFGESILD
NTPRHATIVTREFSELLRVEQKEFRSLWEKYHHCMAGLLPPPYGVMESGGSDRMPEKKNI
RKNSFVSVSRHPNKKSFLESPAKVHAKSLPQVPSEKILLAGKILRNAILSRVPHMIRDRK
YHLKTYRQCCVGTELVDWQMLQSSCVHSRIQAVAMWQVLLEEGVLNHVDGETDFQDKYLF
YRFLDDEQEDALIPSEEERRESQEELQDTLLFLSQIGPDALMRMILKKPPSERTPDDLEI
IYEELLHIKALSHLSTTVKRELAGVLIFESHERAGTVLFHQGEEGKSWYIILKGSVNVVI
YGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVR
LKEHGQDVLVLENSSQNSVHGFSAAHHKYNIMSGTPEKILEHLLEMMRLDSQFTESDSAL
DDFVLMHCVFIPNSQLCPVLRDHYHAQASEGSDLEKLDYTLNNKRRVIRLVMKWAAMHGE
HLQQEDMVFLEEFLMGVSEDAKVLLALRDQMTELERIIKSSAEDARSSQRKHKVLLQHFN
MADEKLQRRQPIKGDDEILFKVYCCDHTYTTIRVPVASSVREVLEAVADKLGSAEDLILV
GLSSAGEKVLFKPNDVSVFSTLSINGRLFACQRDQLDVLMPLAEQEGPSVGSLANFELMS
SKDVAYHMTFYDWELFHCVHELELIYHTFGRQHVKKTTVNLDLFLERFNEIQFWVITEVC
LCTQLKERVQLLKKFIKIAAHCKEYGNLNAFFAIIMGLSNPAVSRLSQTWEKLPSKFKKF
YGEFENLMDPSRNHRAYRLTVAKLNPPVIPFMPLIIKDMTFAHEGNKTFIDNLVNFEKMR
MIAKIVKTVRYCRSQTFSLDSPLTGKHHPDVWTYVRQLSVIDNQRTLTQLSHGLEPRRS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagcgcacacttcgtctcatgcttcggaatctgccgagtggattatttgtctg
gataaaagaccagcagagcgctcgggtgaagatgtcgacataatcctggcacgtctaaaa
aatgtgaaggctttggagagattccaccctcgtttgctgcagcagatttgtctgtgtggg
ttctacgagtgcttggagaaaggggtcactttgtttcgccagggagacattggtacgagc
tggtatgctgtcctgtctggttccctggatgtgaaagtgtctgaaacatcaagctatcag
gatgccgtcactatttgcacactggggaccggcacggcgttcggagagtcgatcctggat
aacacccccagacatgctacgattgtcactcgggaattcagcgaactcctacgtgttgaa
caaaaggagttcaggtctctgtgggagaaatatcatcactgcatggctggacttcttcct
ccaccctatggcgtgatggagagcggtgggtctgacagaatgccagaaaagaagaacata
aggaaaaattcatttgtttcagtgtccaggcatccaaataagaagtcctttcttgaaagt
ccagccaaagtccacgctaaaagcttgcctcaggttccctctgagaagatcctgctagcg
gggaagattctccgcaatgccatcctttccagagtgcctcacatgatccgagacagaaag
taccatctgaagacgtacaggcagtgctgtgtggggacagagttggtcgactggcagatg
ctgcagagctcctgcgtccactcccgcattcaggctgttgccatgtggcaggtgctgctg
gaggaaggtgtcctcaatcacgtggacggagagacggacttccaagacaagtaccttttc
taccgcttcctggatgatgagcaggaggacgctttgatacccagtgaggaggagaggagg
gagagtcaggaggagctgcaggacacactgctcttcctgtcgcagattggaccagatgct
cttatgaggatgatcctgaagaaaccaccatctgaaagaacaccagatgacttggagatc
atttatgaagaactgctccatataaaggctttatctcacctgtccaccactgttaagagg
gaactagccggagttctcatctttgagtcccatgaaagagcaggaacagtgttgttccac
caaggagaggagggcaaatcctggtacattattttaaaaggctcagtgaatgtcgtcatc
tatgggaaaggtgttgtctgcactctccatgaaggagatgactttgggaagctggcgctg
gtcaatgacgcccccagagctgcctccattgtccttcgagaggacaactgtcatttcctg
agagtggacaaggaggacttcaacaggattttgagggatgtggaggccaacaccgtgcgt
ctgaaggagcacggtcaagatgttctggtgctggagaacagcagccaaaattctgtccac
ggattctctgcagctcaccacaagtacaacatcatgtccgggacgccagagaagattttg
gagcaccttcttgaaatgatgcgtttggattctcagttcacagagtcagattcagcctta
gatgattttgtgctcatgcactgtgtcttcatcccaaacagtcagctgtgtcctgtgctg
agagaccactaccatgcccaggcctcagagggctctgacttagagaagctggactacacg
ctgaacaacaagcgccgggtgatccgcctggtgatgaaatgggctgccatgcacggagaa
cacctgcagcaggaggacatggtcttcctggaggagtttctcatgggtgtgtcagaagat
gccaaagtgcttctagccctcagggatcagatgacagagctggagagaattataaaaagc
agtgcagaagatgccagatcctcacagagaaagcataaagtccttctacagcatttcaat
atggcagacgagaagcttcagagacggcagcctattaagggagatgatgaaatcctgttc
aaagtctactgctgtgaccacacctacaccaccatccgggtccccgtggcctcctcggtc
agggaggtcctcgaggctgtggcggacaagctggggtcagcggaggatctgatcctggtc
gggctcagttcagcaggagagaaagttctcttcaagccaaacgatgtttccgtcttctct
acgctcagcataaatgggcgactcttcgcctgtcagagggaccagctggatgtgttgatg
cctctagctgaacaggagggcccgtctgtagggtcgctggccaattttgaattgatgagc
tccaaagatgtggcttaccacatgactttctacgactgggagcttttccactgtgtacac
gagcttgaactcatctatcacacgtttggaagacagcacgtcaagaagaccactgtgaat
ctggatctcttcctggagagatttaatgaaattcagttctgggtaatcacagaggtttgt
ctgtgtacccagctgaaagagagagttcagctcctcaagaagtttatcaagattgctgct
cactgtaaggagtacggaaatctaaatgccttctttgccatcattatgggactgagtaac
ccagcagtgagcagactcagtcagacgtgggagaaacttcccagcaagtttaagaagttt
tacggagaatttgaaaacctgatggatccatccagaaaccaccgggcatatcgactcaca
gtcgccaaactgaacccccccgtcattcccttcatgccactgataataaaagatatgaca
ttcgctcacgagggcaacaaaacatttatcgacaatttggtcaattttgagaaaatgcgc
atgatagctaagatagtgaagacagtgaggtattgtaggagtcaaacattcagcctggat
tcccctctgaccgggaagcatcaccctgacgtttggacctacgtccgtcagctcagcgtg
atcgacaaccaaaggaccctgactcagctctctcatggactcgagccacgcaggtcttga
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