KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124872752
Entry
124872752         CDS       T08099                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    124872752
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gmu03000]
    124872752
   04121 Ubiquitin system [BR:gmu04121]
    124872752
   03036 Chromosome and associated proteins [BR:gmu03036]
    124872752
Enzymes [BR:gmu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     124872752
Transcription factors [BR:gmu03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    124872752
Ubiquitin system [BR:gmu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     124872752
Chromosome and associated proteins [BR:gmu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    124872752
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     124872752
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box JmjC Cupin_8
Other DBs
NCBI-GeneID: 124872752
NCBI-ProteinID: XP_047229022
LinkDB
Position
8:25253969..25280683
AA seq 1391 aa
MAQSAETCAETGRRLRSICRRMYDENEDLSDVEEIANIRGFSVEEKLSSDCYNSDFVQFM
KGRDFSYEYVQREALRIPLIFKEKDELGISMPDPEFTVSEIKGLVGSRRSVDVMDVSTQK
GSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLEHLIKRPTVVDQVDWVDNMWPPDL
KHSQTEATNIISEMKYPKVQRYCLMSVKGCYTDFHIDFGGTSVWYHVFKGQKVFWLVPPT
PHNLALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFFIPSGWIHAVYTPVDTLVFGG
NILHSFNIPMQFIIHEIENRTKVHSKFRFPFYYEMCWYVLERYLHCLTKRSYLSQEIQKG
SADYETKTESPCSDSRSQDINEDFCGPQVRDGHGEKAERPAGDGTCSPDDVKGPLLKAVL
SVDSEDSCNPSSTSLDFPKTPSDSPGSESQSKWTHLTQHELIGLRTLVEKLESLPENKKC
VPVGIESPQALLDDMKIFLKEHADDDPKLAITGVPVVLWPKKVLKPRPPNRPKPKMAASP
ASAVKLSASRGTSGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQC
IAPVLPHTAVCLVCGEAGKEDTVEDEEEKFNLMLMECSICNEIVHPNCLKIKDSNGLVND
ELPNCWECPKCNHAGKTGKATKQKRGPGFKYASNLPGSLLKEPRLNRDSKEEPEPLPPAL
PVVMATTIVNTLTTTSAVKRKAEREVTSKKNEEEPQRKRPPLLALDSLPRTRLEDNPLRK
KRKLFDTNDEPIMLKKKKKLLKPDDQFSPKLLQQIKTENDHREEDERQWDHEEDVLSLDN
MHFKKKNEYSNEVPNEDTEEEEAAIKERDGTTHDKAKVLASPLLRTSSAREGDHSSSNSP
RAGPSSDTGDGQEKSSAQLKARHQRRRLPNKGLSKELGQEILKMEDPLNNQKHSAEKTEN
NTHYRRPLKNEDSVSNQNCKPMKTEDTQNRRAPKLEDSVANYHRQPLKIEDCSGNQNHSP
VKPETGSEADEQKPKWPLNNGSSDLGDWLRHRGREVNGTPRGYSSLCWNRSIPITPICPR
PLPRRSPPKCVQMERHVIRPPPISPPPDRLLLNDGEAHKMRREAWMKVFSHLPHRDLCVC
MRVCRAWNRWCCDKILWKHISLNRCKSITPLMLSGIIRRQPVGLDLSWTNISKKQLSWLI
NRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQ
LDNRSKLRNVEDLRLAGLDITDTSLCLIIRYMPLLSKLDLSYCNHVTDQSVNILTAAGTT
TRDSLTDINLSVCNRVTDQSLTYFKRCGSICHIDLRYCKQVTKEGCDQFIAEMSVSVQFE
LIEDKLLQKIS
NT seq 4176 nt   +upstreamnt  +downstreamnt
atggcccagtccgcggagacgtgtgctgaaactggacgaaggctgcgctccatctgccgg
aggatgtacgacgagaacgaggatctatctgacgtggaggaaatcgcaaacatcagaggt
ttcagcgtggaggaaaagctctccagtgactgctacaactcagattttgtccagttcatg
aagggcagagacttctcttatgaatacgtgcaaagagaggccctcaggataccacttatt
tttaaagagaaagatgaattagggataagcatgcctgatccagagttcacagtcagtgaa
ataaaaggattagttggtagtcgcaggtctgtggacgtcatggatgtgagcactcaaaaa
ggctctgaaatgagcatggctcagtttgtccgttattatgagacaccagaggaagagcgt
gacaaactcttcaatgtcatcagcttagagttcagccacactaagctggagcatctcatc
aagcggcccacagtggtggatcaagttgactgggtggacaacatgtggcctcctgatctg
aagcatagccaaacagaagccaccaacattatttcagagatgaagtaccctaaagtgcaa
aggtactgtttgatgagtgtaaagggctgctacacagactttcacattgatttcggaggg
acttcagtttggtaccatgtattcaagggacagaaagtgttctggcttgtacctccaacc
ccacataaccttgcactgtatgaggactgggtcctatcaggcaagcagagtgacatcttc
ctgggagaccgggctgatggatgccagagagtggagctgaaacaaggatacactttcttc
atcccgtctggttggatccatgccgtttacactcctgtggacacactagtgtttggaggc
aacattctgcacagcttcaacatccctatgcagtttattatccatgagatagaaaaccgg
acaaaggttcattccaaattccgcttcccattttactatgaaatgtgctggtacgtcctg
gagcgatacctgcactgtctgaccaaacggtcctaccttagtcaggagatccagaaagga
tctgccgactatgagacaaagacagaaagcccttgttcggactccaggagtcaagacata
aatgaggacttctgtggacctcaagtcagggacggccacggagaaaaagctgaaagaccc
gctggagatggcacctgctcacctgacgacgtcaagggccccctgcttaaagcggtttta
tctgttgactctgaggacagctgtaatcctagctccacgtctctagatttccccaaaacc
ccctcagattctccaggctccgagtctcagagcaagtggactcacttgactcagcatgag
ctgatcgggctcaggacactggtggagaagttggagtcactccctgaaaataaaaaatgt
gttccggtggggatagagagccctcaggccctcctggatgacatgaagatttttctgaag
gaacatgctgatgatgacccaaagttagcaatcactggggttcctgttgtattatggcct
aagaaagtgttaaagcctcggcctcccaaccggccgaaacctaagatggcagcgtctcct
gcatcagcagtcaagctgtcggccagccggggaacgtctggtgccaggagaagaaggacg
cgttgtcgaaagtgcgaggcgtgtctccggacggagtgcggcgagtgccacttctgtaaa
gacatgaagaagtttggagggccggggcgaatgaagcagtcctgcatcatgaggcagtgc
attgcacctgtcctgccccacacagcagtgtgtcttgtctgtggagaagctggaaaggag
gacacggtggaggatgaggaggagaagtttaacctgatgctcatggagtgctccatatgt
aacgagattgttcatccaaactgtctcaagattaaagattcaaacggattagtcaatgat
gagctgccaaactgctgggagtgtccaaagtgtaaccatgcggggaaaactgggaaagcc
acaaagcaaaaaagggggccaggatttaagtatgcgtcgaaccttcctggctcccttctc
aaagaaccacggttaaaccgagactcaaaggaggagcctgagccactgccgcctgcgctg
ccggtggtgatggctacaacaattgttaacacgctgacgactacgtctgctgtgaaaaga
aaagcggagcgggaagtaacctctaagaagaacgaggaggagcctcaaaggaaacgtccg
cccctgttagctctggatagtttgccacgaacacggcttgaagataatccgttacggaag
aaaaggaaactgtttgacacaaatgatgaacccattatgttaaaaaagaagaaaaagctt
ttaaaaccagatgatcaatttagtccaaagcttttgcaacaaatcaagacagagaatgat
cacagggaggaagatgagagacaatgggaccatgaagaagatgtcttatccctagataat
atgcattttaaaaagaagaatgagtattccaatgaggtgccaaatgaggacacagaagaa
gaggaggctgcaatcaaagagagagatggtactacacatgacaaagccaaggtgctcgca
agtcctctgctaagaacatcttcagccagagaaggtgaccattcatcctccaactctccc
agagctggaccaagcagtgatacaggagatggccaggagaagagttctgctcagcttaaa
gctcgccatcagcgccggcgtcttccaaacaaaggactgagcaaagaattgggccaagag
attctcaagatggaggatcctctgaacaaccagaagcatagcgcagagaagacagagaac
aacactcattatcgcaggccactcaaaaatgaagattctgtgtccaatcagaactgcaaa
cctatgaaaacagaagacactcagaatcgtagagctcccaaactggaggacagtgtcgca
aactaccacagacagccgctgaaaatcgaagactgctcgggcaaccagaatcacagtcca
gtaaaacctgagacagggagtgaagcagacgagcagaagccaaaatggcctcttaacaat
ggcagcagtgacctgggtgactggctgagacacagaggaagggaggtaaacgggacaccg
cgtggttactcttcactttgctggaacagaagcataccgattacaccaatatgtccgcgt
ccactcccccgccggtcaccaccaaagtgcgttcaaatggagcgccacgtcatccgaccc
cctcccataagccccccgcctgacagactgctgctgaatgatggtgaagcccacaagatg
cggcgggaggcatggatgaaagtgttcagtcacctccctcacagagatctctgtgtctgc
atgcgtgtctgcagagcttggaacagatggtgctgcgacaaaatactctggaagcacatc
agcctgaaccgctgtaagtcaataacacctctgatgctgagcggcatcatccgtaggcag
ccagtaggtctggacctcagctggaccaacatttccaaaaagcagctcagctggctaatc
aacagacttcctggcctgcgtgtgttgcttctttcaggatgctcttgggttgctgtctct
gccctgtgcacttctagctgtcctctactgcgaacgctggacgttcagtgggtcgaggga
ctgaaagacgcccagatgagagacttactgtcgccgcccacagataacagaccaggtcag
ttagataacaggagtaaactgcgtaacgtggaggaccttcggctggctggactggacatc
accgacacgtctctgtgcctcatcattcgttacatgcctctcttatcgaagctggacctc
agctattgcaaccatgtcaccgaccagtccgtcaacatcctgacagctgcagggacgact
accagagactcgctcactgacatcaacctgtcagtctgtaacagggtcaccgaccagtcg
ctgacctacttcaaacgctgcggaagcatctgtcacatcgacctgcgatactgcaaacag
gtgaccaaggaggggtgtgaccagtttattgccgaaatgtcagtcagcgttcagtttgag
ctaatagaggacaaactgctgcagaagatcagctaa

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