Girardinichthys multiradiatus (darkedged splitfin): 124872984
Help
Entry
124872984 CDS
T08099
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu00280
Valine, leucine and isoleucine degradation
gmu00650
Butanoate metabolism
gmu00900
Terpenoid backbone biosynthesis
gmu01100
Metabolic pathways
gmu03320
PPAR signaling pathway
Module
gmu_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
124872984 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
124872984 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
124872984 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
124872984 (hmgcs1)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
124872984 (hmgcs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Lectin_C_term
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
124872984
NCBI-ProteinID:
XP_047229394
LinkDB
All DBs
Position
8:2575154..2588112
Genome browser
AA seq
515 aa
AA seq
DB search
MPGSASSSCLGPWPKDVGVIAMELYFPSQYVDQAELEQFDGVAAGKYTLGLGQARMGFCS
DREDINSLCLTVVQRLMERNGLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEDSGNTDV
EGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGGAGAVAML
IGHNAPLAFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIECYLSALDRCYSVYRNKI
HAQWQREGSDKRFSLDDFGFLVFHSPYCKLVQKSLARLMLNDFLNHPSPDTETGHFAGLD
AFRDVKPEETYFDRDVEKAFMKASAELFKTKTKPSLLISSQNGNMYTPSVYGCLASLIAE
HTASQLAGQRIGVFSYGSGFAATLYSLRVTQDHTPGSGLDKLVSSLSDLGVRLDSRTKVP
PSVFSESMKLREETHHLASYVPRSSVDDLFPGTWYLTRVDDKHRREYARRPLDDDLPSEP
ELVRSTTASEHILSPVKKMPRIPAVAAGPEATNSK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgccgggatcagcctccagtagctgcttgggaccgtggcccaaagatgtgggggtcatt
gccatggaactttacttcccatcccagtatgtagatcaggctgagctcgagcagtttgat
ggtgtggcagctgggaagtacactttaggactgggacaagctcggatgggtttctgctca
gaccgtgaggacatcaactctctgtgcctgactgtagtccagaggctgatggaaaggaat
ggcctgtcctatgactgcattggccgtctggaggttggcacggagaccatcatcgacaag
tcaaaatccgtcaagacggtcctcatgcagctgtttgaggactctggcaatacagatgtg
gaggggattgacaccacaaacgcttgttatggtggtacagctgcactcttcaatgctgtg
aactgggtggaatccagttcatgggatggacgttatgctctggttgttgcaggggacatc
gctgtctatgccactggaagtgctcggcctacagggggcgctggggcagtggccatgctc
attgggcacaatgcacctttagcctttgaaagaggtctacggggaacacacatgcagcat
gcgtatgacttttacaagccagacatggtgtcagagtaccctgtggtggacggcaagctg
tccatcgaatgctacctgagtgccttggaccgctgctactctgtgtatcgcaataaaatc
catgcacagtggcaaagagagggttcagacaagcgcttcagcctggacgactttgggttt
ttagtcttccactctccctactgcaagctggtccagaagtcgttggctcgactgatgctg
aatgactttctgaaccaccccagccctgacacggaaacaggacattttgcaggactggac
gccttcagagatgtgaagccagaggagacgtacttcgacagagatgtggaaaaggccttc
atgaaggccagtgcagagctgtttaaaacgaagaccaagccatcgttgctgatctccagt
cagaatggaaacatgtacacgccctctgtgtatggctgcctggcatcgcttatagcagaa
cacacagcatcacagctagcagggcagaggatcggagtgttctcctacggttcagggttt
gctgcaactctatattctctcagagtcacacaggaccatacccctggatctggattggac
aaacttgtctccagcctgagtgacctgggggtcagactggactccagaacaaaagtgcca
ccatcagtcttttctgaaagtatgaagctgagagaggagactcaccacttagccagctat
gtccctcggagctcagtggacgatctgttcccagggacatggtacttgacacgagtcgat
gacaaacaccgcagggaatacgcccgcagaccactggacgatgacctgccctcagaacca
gagctggttcgctccactacagcctctgagcacatcctcagtccagtcaagaaaatgcct
cgcatccctgcagtcgcagctggcccagaggcaaccaacagcaagtaa
DBGET
integrated database retrieval system
