Girardinichthys multiradiatus (darkedged splitfin): 124875033
Help
Entry
124875033 CDS
T08099
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03440
Homologous recombination
gmu03460
Fanconi anemia pathway
gmu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124875033
09124 Replication and repair
03440 Homologous recombination
124875033
03460 Fanconi anemia pathway
124875033
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmu01009
]
124875033
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124875033
03036 Chromosome and associated proteins [BR:
gmu03036
]
124875033
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124875033
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124875033
Protein phosphatases and associated proteins [BR:
gmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124875033
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124875033
Multi subunit type E3
BRCC complex
124875033
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124875033
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124875033
BRCA1-A complex
124875033
BRCA1-B complex
124875033
BRCA1-C complex
124875033
BRCA complex
124875033
FA (Fanconi anemia) pathway
Downstream FA components
124875033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-Nse
RING_XB3-XBAT31
RTT107_BRCT_5
zf-RING_5
zf-RING_6
zf-ANAPC11
zf-MIZ
zf-rbx1
zf-RING_4
zf-RING_10
Sina_RING
zf-PARP
TRAF3_RING
U-box
PTCB-BRCT
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
124875033
NCBI-ProteinID:
XP_047232763
LinkDB
All DBs
Position
10:8082764..8117751
Genome browser
AA seq
1373 aa
AA seq
DB search
MATKATDVKKGIAVLWETLQCPICLDLMTAPVSTKCDHQFCRYCITKLLDGSKQNRANCP
VCKSKITKRSLQESPGFQRLVSGLQDIIQAYEHDTCTNYFTGLPQQERRNTNVTNTETSK
HGCDLSSGDTFGAELDKMGVDFPQSCSSTVAAQTGFAQLMGLEDSDPVTAENEGLDSGLG
DIPPTSDKKTSYCTDNLEPETANVGKNATSTRVAKNKRSSVNPVKSVCSKSNQGEPGQQH
VKESSRKKRKKDLEPDKILDQKKKKSLEKVAEWLLKVPTEDELELERPLHNSDESDSCTS
MSTLDVEPQDTELNPKREDRTKALEEQVFGAVYKRRGSKVAKPLMAKETQTCKRFPKLRE
KRDVRLCEERQMVGNDTSSDFFKVPEQTEVEEKLDKNVEDLNHLSESDNNQGEHEVPVAD
IVRETTPPIRGSRTSLQQLDSDFQEQIQLKSKNTEEKSDRRKGNYLKSTKKPSKVAKPLV
LVGVQSGEISPKPNERTEEVEAQIETYPSSEDQDTSIRSTRRSRRLQLFVEEIQGRHKKT
AKTSSATKKENNGEKQTEVANGETLDALLPESRNRTKGAKRNGCVYEDEIGGIESTEKSG
KTFLRQAEAEVPKSRSPAKAVADPPASVVPNSTSSTDPLVVGPTLESEKPENDCQPGSQQ
EICVNEANCAVKEYEGCKNDSEVDTEQLLRSFKAAKRKSFHFGEPKVKRSRGSDEENAES
HRNCSSSELSENINVSKETEKCICRDVISPSNSPIQIRKPDQALLEASNPNSNCAGQDVD
AENCPSRSSFGSGLSPNKVSKRERESPLSVVPRVVDSGLRFTAVEHEVSKGSQITDGQCD
CNLKEIRDGFLRDPSLNEGETIFIGESSLTPDALETTANQLIHKANGNGSGSEEISNQSS
IKITPRKKRRTQRLESSAESDSSRSEEELPTLAQIFGTSDHPQAGIKDQGEISQTNRCEG
VGGETNTGEPISRPPASPNPDQVDSSQASVDLFGTPDECDAPENDVGVSIESSQFSSEVL
VTQQKIEMQKELVRLEKLMALVSEVLQEKEGSDAAEVATETDQSKKNRGRDVHRPLQNDQ
DQVQGSDRKDILDAKTKPSEGKVVTELGLAKRGGISETALHHSGATEKVAKSPNSTSATK
TVKNCDSPPDCQEDKENNSPPKESSKAKLVFVSSGLGPNEQMMVKQFAKKLGGRVVSQVT
PEVTHIIMRTDDQLVCERTLKYFLGIAGRKWVVSFQWISECFKEKKLLGESSFEVRGDVV
NGPNHQGPLRARTTGDSNLLMMGYKICFKGPFTDMSTDEMEWMVEWCGATVVKDPLLLDG
KQKSHQIVIVQPRADSSSSSYSSLSRKATVVTRGWLLDTVATYTLQNYSSYTV
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaaagccacagatgtcaaaaagggtattgccgtcctgtgggagactcttcag
tgtcccatttgcctggatttaatgacggcgccggtctctactaagtgtgatcaccagttt
tgcagatattgtattacaaaacttttggacggctccaaacaaaacagagccaactgcccc
gtgtgtaaatccaagataacaaagaggagcctgcaggagagccctgggtttcagagactc
gtttcaggactgcaagacatcatacaagcatatgaacacgacacctgcacaaactacttt
actggactgccacagcaagaaaggaggaacactaatgtcaccaatacagaaacaagtaaa
catggttgtgatttatcatctggagacacatttggagctgaactggacaaaatgggagtt
gattttccacagtcctgctcctcaactgtagcagctcagactgggtttgcacagctcatg
ggactcgaagactcagatcctgtaacagcagaaaatgaaggcctggatagcggcctgggt
gacatcccaccaacctctgacaagaaaacgtcctactgtacagataatttagagccagaa
acagcaaatgtcgggaaaaacgctacatcgactcgtgtggctaaaaacaaaaggtcttct
gtcaacccggtgaagtctgtgtgttcaaaatcaaatcaaggggaacctggtcaacaacat
gtcaaagagtcctctagaaagaaacggaaaaaggatttggagcccgacaagattcttgat
cagaaaaagaagaaaagtttagagaaagttgcagagtggctcctgaaagttccaactgaa
gacgagttggaactagagaggcccctccacaactcagacgaatcggatagctgtacgtct
atgtctacgctggatgttgagccacaagacactgaattgaatcctaagagagaagatcgc
accaaagcccttgaagagcaagtttttggtgccgtctacaaacgaagaggaagcaaagtt
gcaaagccactaatggctaaggaaacacaaacttgtaaaagatttcccaaattgagagag
aaaagggatgtccgtctttgtgaagagagacaaatggtaggaaatgacaccagcagtgac
ttttttaaagtacctgaacagacagaggtcgaggaaaagcttgataaaaatgtagaagac
ttgaatcatttgtcagaaagtgataataatcagggagagcacgaggttcctgtagctgat
attgtacgagaaacgacaccaccaataagaggaagtcgtacaagtctacaacagcttgac
agtgattttcaagagcaaatccagttgaaatccaaaaatacagaggagaaaagtgatcgt
aggaagggaaactatttaaagtccacaaagaaaccatctaaagtggcaaaacctcttgtt
ttggtaggagttcagagcggggaaatcagtcctaaacccaatgaaagaaccgaggaagtt
gaagctcaaatagagacctatcccagcagcgaggaccaggacacttcaatcaggagcacc
agaaggagcagaagacttcagctttttgttgaggagattcaggggcgtcacaagaaaacg
gccaaaacatccagtgcaactaaaaaagagaacaacggcgaaaagcaaactgaagttgcc
aatggtgaaacattggatgcattgctgcctgaaagcagaaaccgaacaaaaggagctaaa
agaaatggatgtgtttatgaggacgaaattggagggatagaaagtacggagaagagtggg
aaaacatttttgagacaagctgaagcagaagtacccaaatcccgatctccggctaaagct
gttgctgaccctcccgcctctgtcgtcccaaactccacaagctcaaccgatccgctcgtg
gtaggtccaacgcttgaaagtgagaagccggagaatgattgccaacctggttctcagcaa
gaaatctgtgttaatgaagctaattgtgccgtaaaagagtacgagggttgcaagaacgac
agtgaggtggacacagagcaactactcaggagcttcaaagctgctaaaaggaaatctttc
cattttggggagccaaaggtgaagagaagtcgtggttcagatgaagaaaatgcagagagc
catcgtaactgttcaagctctgaattatcagaaaatattaatgtttcaaaagagacagaa
aaatgtatttgtagagatgtgatttccccttccaactcacccatccagatcagaaaacca
gatcaagctttgctggaagcctccaatcctaatagcaactgtgcagggcaggacgttgat
gctgaaaactgtccctccagaagcagcttcggcagcggtctcagtccaaataaagtatca
aagcgtgagagggaaagtcctctgtctgtcgtccctcgggtagtagattctggcctccgc
ttcacagctgttgaacatgaagtatcaaagggctctcagatcactgatggtcagtgtgat
tgcaacctcaaggagatcagagatggctttttaagagatccttcgcttaatgaaggtgag
actattttcattggagagtcttctttaacccctgatgctctggagaccacagccaaccaa
ttgatccacaaagcaaatggaaacggcagcggtagcgaagagatcagcaatcaatcctcc
atcaagatcaccccgaggaagaagaggagaactcagaggctggaatcatcagccgagtct
gatagcagcagatccgaagaggaattaccgacgttggctcagatctttggaacatcagat
catccccaagctggaatcaaagatcagggagaaatcagtcaaacaaacagatgtgaggga
gtcggtggggaaaccaacacaggagaaccaataagtcgtccacctgcaagcccgaacccg
gaccaggttgactccagtcaggcatctgtggacttgttcggcacaccagatgaatgtgat
gcccctgaaaatgacgttggtgtttccattgaatcctcacaattctccagcgaagttctt
gttacccagcaaaagatagaaatgcagaaggagctggtgaggctggagaagctaatggct
ctggtgtcagaggtgcttcaggagaaagaaggcagtgatgccgcagaagtggccacagaa
accgatcagagcaaaaaaaacaggggccgagacgttcacagacccctccagaatgaccag
gaccaagtccagggttccgacaggaaggacattttagatgcaaaaacaaaaccatctgaa
ggcaaagtggtgactgagctaggattggcaaagcgtggcggcatttcagagaccgctttg
catcacagtggggccactgaaaaggtcgcaaagagccctaattcaacttctgcaaccaaa
acggtaaaaaactgtgattcaccgccagattgccaagaagacaaagaaaacaacagtcct
ccgaaagaaagctctaaagctaaacttgtttttgtgtcgtccgggttgggccccaatgag
cagatgatggtgaaacagtttgccaagaaattggggggtcgtgttgtttcccaggtgaca
ccagaggtgacccatatcataatgcgtacagatgaccagctggtctgtgagcgcacactg
aaatacttccttggaattgcaggcagaaagtgggtagtcagcttccagtggatttctgaa
tgcttcaaagaaaagaagctcttgggggagagttcatttgaagtgagaggtgatgtggtg
aacgggcccaaccaccaggggcccttgagagcccgtaccacaggggacagtaatctgctc
atgatgggctacaagatctgcttcaagggaccttttacagacatgtcaacagatgagatg
gagtggatggtggagtggtgtggagctaccgtagttaaagatccgcttctccttgacggc
aaacagaagtcccaccagatcgtcattgtacagcccagagccgattcatcgtcctcctct
tacagcagtctgtccaggaaggccacagttgtgacccgcggttggctgttggatacagtt
gcaacatacacgctgcaaaactacagcagttacacagtgtga
DBGET
integrated database retrieval system
