Girardinichthys multiradiatus (darkedged splitfin): 124875439
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Entry
124875439 CDS
T08099
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124875439 (scn4aa)
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124875439 (scn4aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
124875439
NCBI-ProteinID:
XP_047233563
LinkDB
All DBs
Position
10:19445199..19463918
Genome browser
AA seq
1755 aa
AA seq
DB search
MFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGSFTFLRDPWN
WLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKMGDVM
VLTVFALAVFALVGLQLFMGNLRHKCVRWPILTNKGLFEVFNATYAFNGTMYLNTTMGIN
EPAYSNSTFDFTEYIENSENHYFVEGSQDALICGNSSDAGKCPEGYTCMKAGGNPNFGYT
SYDSFGWAFLALFRLMTQDFWENLFQLTLRAAGRTYMLFFVVVIFLGSFYLINLILAVVA
MAYYEQNQATQLEAIEKEEEFQRLLEQLKNQEQQAQFHGSLATLTSTKSLSQHTLSKMVD
DEHGLKHDETVNDCNGKVVPLLMIRAPTMDESAVDYEVKEKSLSSLHSTFHLDEPGLRQR
SASAATVLSAVAMEELEEAQRPCPPCWYKFANMFLKWDCCTTWIVFKKWVHFVVMDPFVD
LGITICIVLNTLFMAMEHYPMTPEFDNMLSIGNLVFTGIFAAEMFFKLIAMDPYYYFQVG
WNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISADCELPRWHMNDFFHSFLIVFRILCGE
WIETMWDCMEVAGPAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSVGDDDGEMNN
LQIAIGRITRGIDWLKTFLIQRIQQILGKKPNEPDKDMVDDGKPKSEEIEMNHLDACLTL
KASDRILDGPVQSQPSGFIVDGELSLNVPIAEGESDYDNLSEDDEDDEEDSEDSDHSGSP
LQRDYQPNTKNLEDESSIPAKIKHEDGDSSVCSSADYQPPEPEPEKEEEEEPAPVEPEAC
FTDNCVSKWPCLTVDITSDKGKKWWNLRKTCFTIVEHDWFETFIIFMILLSSGALAFEDI
YIERRRTIKIILEFADKVFTYIFVIEMLLKWVAYGFKTYFTNAWCWLDFFIVDISLISLV
ANWMGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLI
FSIMGVNLFAGKFYRCINTTTEELFPITEVNNRSECLALKEATEEARWINVKINYDNVGK
GYLSLLQVSTFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIG
VIIDNFNQQKKKFGDQDIFMTDEQKKYYEAMKKLGSKKPQKPIPRPTNPIQGMVFDFISQ
QFFDIFIMVLICLNMVTMMVETDDQSPEKEDFLFKINVAFIIVFTGECVSKLFALRQYFF
TNGWNIFDFIVVILSIAGTMLSDLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLL
FALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGIDDIFNFETFGGSIICLFQI
TTSAGWDGLLLPMLNREPPDCDPEFENPGTDVKGNCGNPGMGMMFFCSYIIVSFLVVVNM
YIAIILENFNVAQEESGDPLCEEDFEMFNETWEKFDLDGTMFIEYSRLSDFCDTLQEPLR
VAKPNRLRLIEMDLPLVIGDRIHCLDVLLAVTQMVLGDTVEMAAMRESIEAKFILSNPTK
DSFAPITTTVRHKEEQQAAVILQRAYRKHLLKRCIRHAAFMHRSKRIGRKDKDDNPPEKE
GLLARRMRVLYESNVDFADKMEQEALKTLASQELLNTDCKGSQCDQEPPVQNMIVVPVEI
TNELLLHSAHQSNIL
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatgattaccattctgtcgaactgtgtattcatgacaatgagtaacccacca
gcatggagtaaaactgttgagtatgtttttacaggaatttatacctttgaggcaacagtc
aaagtgttgtcgagaggtttctgtattggttcttttacattccttcgagatccatggaac
tggctggatttcatggtgatcagcatggcctatgttactgagtttgttgaccttggcaat
gtgtcagccctcaggacatttcgtgtacttcgagccctaaaaacaattaccgtaatccct
ggtctgaaaaccattgtgggcgctttgatccagtccgtgaagaaaatgggggacgtcatg
gtcctaaccgtctttgcccttgcagtttttgcccttgttggcctccagcttttcatggga
aacctgcgtcacaaatgtgtgcgatggcccattctgacaaataaaggattgtttgaagtg
ttcaatgccacctatgcttttaatggaacaatgtacctcaacactaccatgggtatcaat
gagccagcctactccaatagtacttttgattttactgaatatattgaaaattcagaaaat
cactattttgtagaaggcagtcaagatgctctaatttgtggcaacagctctgatgctgga
aagtgcccagaaggatacacgtgtatgaaggctggcgggaaccctaactttggttacacc
agttacgactcttttggatgggccttccttgcactgttcagactcatgacacaagacttc
tgggagaatcttttccaactgacactacgggcagctggtaggacatacatgctgttcttt
gtggtggttatctttctggggtccttctacctcatcaacctcatcctggctgtagtagca
atggcttactatgaacagaatcaagcaactcaactggaggccatcgaaaaagaggaagaa
ttccagcggcttttagaacaactaaaaaatcaagagcagcaggcacaatttcatggaagc
ctagccaccctgaccagtacgaagtccctaagtcaacacacattatctaagatggtagat
gatgaacatggtctcaaacatgatgagactgtaaatgactgcaacggaaaagttgttcct
cttttgatgatccgagcacccaccatggatgagtctgctgtagattatgaagtcaaagag
aagtcactgagctctctgcacagcacatttcatctggatgaacctggcttgagacagaga
tctgccagtgctgcgactgtgctttctgcagttgccatggaagagttggaggaggctcag
agaccatgcccaccttgctggtacaaatttgcaaacatgttcttgaagtgggattgctgc
accacttggattgtttttaaaaagtgggtacactttgtggtcatggatccctttgttgac
ctcggtattaccatttgcatcgtgctcaacacccttttcatggcgatggagcactacccc
atgaccccagagtttgacaacatgctctcaataggaaatctggttttcactggaatcttt
gcagctgaaatgtttttcaagctcatcgccatggatccctactactatttccaagttggc
tggaacatttttgacagcatcattgtcactctcagcttggtggagttgggactggcaaac
gtccagggtctatcagtcctaaggtccttccgtttgcttcgtgtcttcaaactggcaaag
tcttggcccacactcaacatgcttattaagattattggtaactcagtgggagctttggga
aacctgaccttggtgctggccatcatcgtcttcatttttgcagtagtgggcatgcagctc
tttggaaagagctacaaggagtgtgtttgcaagatctctgcagactgtgagctgcctcgc
tggcacatgaatgacttcttccactccttcctcatcgttttccgcattctgtgcggcgag
tggattgagaccatgtgggactgcatggaggtggctggacctgcgatgtgcttaattgtc
ttcatgatggtcatggtcattggaaatctagtggtattgaacctcttcttggccttgctg
ctcagctcattcagtggagacaacctctcagtaggggatgacgatggagagatgaacaat
ttgcagattgcaattgggaggatcacacgaggcattgattggttaaaaacatttctcata
caaagaatccagcaaatacttggtaaaaagcccaatgagcccgataaggacatggtggac
gatggcaagcctaaaagtgaggaaattgaaatgaaccatttggatgcctgtctgactctt
aaagcatcagataggattttagatggcccagtgcaaagccaaccctcaggattcattgtg
gatggagagctcagtctgaacgtcccaatcgctgaaggagaatctgattatgacaatctg
agtgaagatgatgaggatgatgaagaagattcagaagatagtgatcattccgggagccca
ctgcagagagattatcaaccaaacacaaaaaacctagaagatgaaagtagcatcccagcg
aaaattaaacatgaagacggggattcttcagtctgcagctcagctgactatcaacctcct
gagcccgaacctgaaaaggaggaagaagaggaaccagctcctgtagaaccagaggcctgt
ttcactgacaactgtgtgagcaaatggccatgtttgacagtggatataaccagtgacaaa
ggtaaaaaatggtggaatcttagaaagacttgcttcaccatcgtggagcatgactggttt
gaaaccttcatcatcttcatgatcctcctcagcagtggggctctggcctttgaagacata
tacatagaaagacgacgaacaattaaaataattctggagtttgctgacaaggttttcacc
tacatttttgtcattgagatgcttctcaaatgggttgcgtacggcttcaagacctacttc
accaacgcttggtgttggttagactttttcattgtagatatttccttgattagcttagtt
gcaaactggatgggctactctgatcttggtccgatcaaatccctgagaaccctcagagcg
ctgaggcctcttcgcgcactttcaagatttgaaggcatgagggtggtggttaatgctctt
gttggagcgattccctccatctttaatgtcctgctggtgtgtctgattttctggctcatc
ttcagcattatgggagttaatttgtttgcgggaaagttctaccgttgcatcaacaccacc
acagaggaactttttcctataactgaggtcaacaatcgaagcgagtgcttggcccttaaa
gaagccaccgaggaggctcgttggattaacgtcaaaatcaactatgacaatgttgggaaa
ggctacctgtccctgcttcaagtgtcaacttttaaaggttggatggacataatgtatgct
gctgtggactcaagagaggttgaggagcaaccatcttatgaaatcaacctttacatgtac
atctattttgtcatcttcatcatctttggttctttcttcaccctaaaccttttcattggt
gttattattgacaatttcaaccaacaaaagaaaaagtttggagatcaagacatttttatg
actgatgaacagaaaaaatactatgaggccatgaagaaactcggttccaagaagccacag
aagccaattccacgaccaacgaacccaatccaggggatggtttttgatttcatcagtcag
cagttttttgacatcttcattatggttctaatctgcctcaatatggtcaccatgatggtg
gaaacagatgaccaaagcccagagaaagaggattttctctttaaaataaacgtggccttc
atcattgtctttaccggagagtgtgtgtcgaagctctttgcgttgcggcagtatttcttc
accaacggatggaacatttttgatttcattgtggtcatcttgtcaatagctggaacaatg
ctctcagacttaattgagaagtactttgtttccccaacactcttcagagtgatcagacta
gccaggattggcaggattctgcgccttattaaaggagctaagggtatccggacgcttcta
tttgccctaatgatgtcccttcctgctttgttcaacattggtcttctgctttttctgatt
atgtttatcttctccatatttggcatgtcaaattttgcctatgtcaagaaagaagctgga
attgatgacatttttaactttgagacctttggtggtagcattatctgcttgtttcagatt
acaacatctgctggatgggatgggcttttacttccaatgctgaacagggaacctccagac
tgtgatcccgaatttgagaatccaggcacagatgtaaagggtaattgtggaaacccagga
atgggtatgatgttcttctgcagttacatcattgtttcattcctagtggtggtcaacatg
tacattgccatcatcttggagaacttcaatgtggctcaggaagagagcggtgacccactt
tgtgaagaggactttgagatgttcaatgaaacttgggagaagtttgacttagatggaacg
atgtttattgagtacagccggctctcagatttttgtgatactttgcaggagcctctcagg
gttgccaagcccaaccggcttcgtctgattgaaatggatctgcccctggttattggggac
aggatccactgcttggatgttttgttggctgttacacagatggtattaggagacacggtg
gagatggcagcaatgcgggagagcattgaggctaagttcattctgagcaaccccacaaag
gactcctttgcaccaattactacaacagtgcgccacaaggaagagcaacaggctgctgtc
atccttcaacgagcttaccgcaaacatcttctgaagcgttgcatacgccatgctgccttt
atgcacagatcgaagaggattggtagaaaggacaaagatgataatccacctgaaaaagag
gggttgcttgcacgaaggatgagggttctctatgaaagtaatgtagactttgctgataaa
atggagcaagaggctttaaaaactctagcaagccaagaacttcttaatacagactgcaaa
gggtcccagtgtgatcaagagcctcctgtgcagaatatgattgttgttcctgttgaaatt
accaatgagttgttattacattctgcccaccaatccaacatcctgtaa
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integrated database retrieval system
