Girardinichthys multiradiatus (darkedged splitfin): 124876225
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Entry
124876225 CDS
T08099
Symbol
trpc6a
Name
(RefSeq) short transient receptor potential channel 6a isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124876225 (trpc6a)
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124876225 (trpc6a)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
YVC1_C
Cmr1_C
DUF6744
Motif
Other DBs
NCBI-GeneID:
124876225
NCBI-ProteinID:
XP_047234795
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All DBs
Position
11:25340959..25362198
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AA seq
882 aa
AA seq
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MNHRPLVGDRSSRAAGNADRTGARSRDNLLPYDDFGEEYCCAGQCLGRHSSSDRQLTARL
SAVKRRQALRGPAYMFSGPSFSPSDVEQRFLEAAEYGNIPEVRRMLLHIPNLNVNAVDYM
GQNALQLAVANEHLEVTELLLGRADLARVGDALLLAISKGYVRITEALLSHPSFRDAHRL
TASPAQVDMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVHTLLSKGARIAPPHDYFC
GCDSCNYQQQYDSFSHSRSKINAYRGLASPAYLSLSNEDPVLAALELSNELAMLADIEKE
FKNDYSRLSNQCKDYVVGLLDLCRSTEEVEAILNGETDSDDSYELPGRPSLTRLKLAIKY
ELKKFVAHPNCQQQLLSIWYENLPGLRQQTTAVKLLVVLAVAIGLPGLAVAYWVTPCSRV
GKVMRSPFMKFVAHASSFTVFLGLLILNAADRFAGTTLLPNMTHHQQPGSPQLKLDPLLL
HRKTTTPFTWMEILIISWVMGMIWAEVKEIWSQGPGEYLVEPWNFLDFGMLAIFLASFSC
RFSAMKQADLAQAYVYKHCKTLIHLPPEIHYFTLARIHWMPSDPQLVSEGLYAIAVVLSF
SRIAYILPANESFGPLQISLGRTVKDIFKFMVIFLLVFLAFMIGMFNLYSYYLGAKQNDA
FTTLEESFKTLFWAIFGLSEVKSVVINNGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMI
NSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSMLGLATAIKSMLLYV
VHRHGEKKTETQLNQLGKNKNPAYGGFNGPTRYQKIMKRLIKRYIIKAQADRESDEITEG
ELKEIKQDISSLRYELLEEKSQNMETLDGLLRRLGEFSTPSS
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagaccgttggtgggtgaccgcagcagccgggctgctggcaacgcggacaga
accggagcaaggagccgggacaacctgctcccgtatgatgattttggggaggaatattgc
tgtgctggacaatgtcttggcagacacagcagctctgacaggcagctcaccgctcgcctc
agcgccgttaaacggcggcaggctctgcgaggtcctgcttacatgttctcgggtccttcg
ttcagcccgtcagatgttgaacagcgtttcctggaggcagctgaatatggcaacatccca
gaggtgcgccgcatgctgcttcacatccccaatctgaacgtcaatgctgtggactacatg
ggacaaaatgcactgcagctggctgtggccaacgaacatctggaggtgacggaactgctg
ctggggagggcagatttggccagagtgggagatgctctccttttagccatcagtaaaggt
tatgtccgcatcacagaggccctgctcagtcacccttcgtttagagatgctcaccgtctg
acagcaagtccggctcaagtagacatgttggatgacttctatgcttatgatgaagatggg
acaaggttttctcatgatgtgactccagtgatacttgcagcacactgccaggagtatgag
atagttcacaccctcctgagtaaaggggctcgtatcgctcctcctcacgactacttctgt
ggctgcgactcgtgtaactatcagcagcagtacgattccttcagccactcacgctcaaag
atcaatgcctacagaggactggccagtcctgcatacctctctctttctaatgaggatccg
gtgctggcagccttggaactcagcaatgagctggccatgctagctgatatagagaaagag
tttaagaacgattacagtcgtctgtcaaaccagtgtaaggattatgtggtgggccttctg
gatctttgtcgcagcacagaggaagtagaggccattctgaatggagaaacagattctgat
gacagctatgaattgccaggtcgcccctccctcacacggctcaaattagcaatcaaatat
gaactcaaaaagtttgttgcccatccaaattgccagcagcagctgctgagtatttggtat
gagaacctgccaggcctgagacaacagaccactgctgttaagctgctggtggtactggct
gtggctataggactacctggactggctgtggcgtactgggtgactccttgcagcagggtg
ggaaaggttatgcgcagtccctttatgaagtttgtggcccacgcctcatccttcacagtt
ttcctgggcctcctcatcctgaatgcagctgaccgttttgctggcaccaccctgttgcca
aacatgacccaccatcagcaacctggaagtccacaactcaagttggaccccttgctgctt
caccgcaagaccaccacccccttcacctggatggagatcctaattatttcatgggtcatg
ggcatgatttgggctgaagtgaaggagatctggagccagggacctggagagtacctggtt
gagccgtggaacttcttggactttgggatgttggccatatttctggcctcgttcagttgc
cgcttctctgctatgaagcaagctgacttggcccaggcctatgtgtacaaacactgcaaa
acattgatccatctgccaccagagatacattactttactctggcacgcattcactggatg
ccctcagatcctcagctggtgtcagagggcctttatgcgatcgcagtggtactgagcttt
tctcggattgcttacatcctgccagccaatgaaagttttggcccactccagatctctttg
ggaaggaccgtcaaagacatcttcaagttcatggtcatcttcctgctagtctttctggca
ttcatgatcggcatgttcaacctgtactcttactacctgggagcaaagcagaatgacgcc
ttcaccaccctggaggagagctttaagacattgttctgggctatttttggactgtctgag
gtcaagtctgtagtcatcaacaatggacacaaattcattgagaacattggttatgttctg
tacggggtttacaacgttaccatggtgatagtcctgctcaacatgctcattgccatgatt
aacagctccttccaggagattgaggatgatgctgatgtcgagtggaagtttgctcgggca
aaactttggttttcctactttgaggagggaaggacactccctgtccccttcaatctggtc
cctagtcctaaatctatgctgggactggccacagccataaagtctatgctcttgtatgtg
gttcacagacacggtgagaagaaaaccgagacacaactaaatcagcttgggaagaacaaa
aatccagcatatggaggttttaatggtccaacaagatatcagaagatcatgaagcgacta
atcaaacgttatataatcaaggctcaagcagacagagagagcgatgagatcacagaaggt
gagctgaaagagatcaaacaggatatatcaagtctgcgctatgagctgctggaggagaaa
tcccagaacatggagacgcttgacggattgttgaggaggctgggagagttcagtacaccc
tcatcttag
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