Girardinichthys multiradiatus (darkedged splitfin): 124876295
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Entry
124876295 CDS
T08099
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04530
Tight junction
gmu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124876295
09142 Cell motility
04810 Regulation of actin cytoskeleton
124876295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
124876295
Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
124876295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PH_11
PDZ_6
PAD
Motif
Other DBs
NCBI-GeneID:
124876295
NCBI-ProteinID:
XP_047234904
LinkDB
All DBs
Position
11:22885996..22970783
Genome browser
AA seq
1673 aa
AA seq
DB search
MGNVESQNGDSGVYRNGEVHLSRKHTSRSLRLTNKKLVTRRQRHSSTVKQEHRNSETSTR
SSSTPSIPQSLAESGLELFSGADEQGEFGINPHWKQRVSMTMRPESYQNEDESLATPTPE
TSEADTIAQDGEEDSMGEGDVPGEERYLQRMTEGPRDGGTFKKKRSKSADMWREDSLEFS
MSDLSQENLTSTEDIIDGGDEEEEEQFTRLRGSAGSTERASSLDHLCSQQNPDLRGQRNR
YIKNHREANCNGDAEGEDGLLSPKEEDSGGYGAFTLPCRRSHCLSEGLSGLGIPATPCPA
FQGRRAHTTQDISGVLGEGSEYGDSGIDGVATEMDADGDLISRRCKAMSASFSLYSATES
SVFNGSDSGSSSAGGGEGRAAEGCRGGVYENFRRELDSQVRTNQGRDCTEEAGSAVSDEQ
SSSTLSSAYPSDTVIGCVQGTVRKAGALAVKNFLVHKKNKKVELATKRKWKQYWVSLKGC
TLFLYESDGRSVIDHNSVAKHALWVENSIVQAVPEHPKKDYVFCLSNSMGDAFLFQTSGQ
TELENWITAIHSACATALARQHHKEDTVRLLRTEIRKLEQKIDMDEKMKKMGDMQLSTVT
DAKKRKTILEQIFLWEQNLERFHIDLFRCRCYLASLQGGEPPNPKRLLGFASRPTKMAMG
RLGIFSVSSFHALVSARTAASISKRNQPVQRTFSKRRSRFSSLWGLDTTSRRKTKGNPSV
QQVFNNGTEPVRKPLECMFEDSASEISKKTEDSMKTVPQQSVDSDIWVPDYLKPSWVSLP
NNQPVLAIVQPGETTLDVLNSVCKTHQIEPSVHYLRVKVWVNNQLLYYVPKSEEEISDLI
YKEIEICLRATKVICFDKAESSTIGYGFTVGATDEDAVQRLHITEVKPGGLALAKGLKEG
DEIQFLNGKSASALQLDDLRAAFRDHMLSLSVSTVPQQDPKMLCFCPPHRFDGEQDTTTD
IFSQSQENILDEVSGLTVESLDESLEEGSLLTLQSPGDHREDRTLMAAGQKSTEQVTAFC
RSLHDLNPLECPMSSSSSSSSSSLSPSPVSALAPAAGTATQRQLSHADKLRKVISELVET
EKTYVKDLHCLIEFYLKPLQKESFLTQDELDVLFGNLEEMVEFQLEFLRTLEDGIKLVPD
LDRLERVDQFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPEFKAFLAE
RNPRQQHSSTLESYLIKPIQRVLKYPLLLRELYSLTDPDSEEHYHLDVAMKAMNKVASHI
NEMQKLHEEYGAVFDQLINEQTADNKEVLDLSMGDLLLHSTVVWMNAPASFGKSKKDPEL
AAFVFKTAVVFVYKNCSKHRKKIGGSHRTSVSEDRDHFRFRHMIATDSLQVRTPASSQAT
AVCELVHTRSESEGRPEKTFQLCCSSPESKKDFLKAVQSILREKQRRLLLKTKSMSPNQK
YVPFGGKRLSALKGARAAMNRAASAPSRTLTRRSLMRNRIIIDADLVFHGNNNSSDNANF
SHHSSYSSSNSPPSHHEPHPSHELQAEDTDRWVEEQFNLGRYEDQCEGIDDRQVKETDIL
SDDDEYCDSVRSLPAEPDSLEAGVEGLNLHSKEVNLNRKMESKSEIDKSVKVDRTKQRDD
SDSFTSCNLSVSRCSKLTPLKQQCAVEGATSNDHDVIWVRRDDFTKGCNSDVF
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtggagagtcagaacggagacagtggtgtgtatcgcaatggagaggtacac
ctttcccgcaaacacacatcccgctcactccgcctcaccaacaagaagctggtcactcgc
cggcagaggcactcttcgaccgtaaaacaggagcacagaaactctgagacctccactcgc
tcctccagcacaccaagcatcccacagtccttggcagagagtggtctagaacttttcagt
ggtgcagatgagcagggagaattcggcattaaccctcactggaaacaacgcgtctctatg
acaatgaggcctgagtcctatcagaatgaggacgagtccttggccacaccgactcctgag
acctcagaggcagacactattgctcaggatggagaagaggattcgatgggagagggagat
gtccctggggaggaaagatacctccagagaatgactgaaggtcccagagatggagggacc
tttaaaaagaagcgatcaaagtcagcagacatgtggagagaagatagtctggagttctct
atgtctgacttgagccaggagaatctcaccagcactgaggatataatcgacggaggagat
gaagaggaggaggagcagttcacacgtctcagaggaagtgcaggctccactgaaagagct
tcgtccctagaccatctgtgcagccagcagaatccagacctcaggggtcagaggaatcgc
tacattaaaaaccacagagaagccaactgcaatggagacgcagaaggcgaggatggattg
ttgtctccaaaggaagaggacagtggcggctatggagcattcaccctcccatgtcgacga
tctcactgtctttctgaggggttgtccggactggggatccctgccaccccatgccctgcc
ttccagggacggcgtgcacatactactcaggacatctcgggtgtcttgggggaaggaagc
gagtatggtgacagcggcattgatggcgttgccacagagatggatgcagatggcgacctg
atctcccggcggtgtaaagctatgtcagcctcgttctcactctactcggccacagagagc
agtgtctttaatggcagcgacagtgggagcagcagcgcaggcggaggagaaggaagagct
gctgagggatgcagaggaggagtgtatgagaatttccggagggagttagacagtcaagtc
aggactaatcaaggcagagattgcaccgaggaggccggctctgctgtaagtgatgagcag
agcagtagcaccctcagcagcgcgtatccatctgacactgtgattggctgtgtacaaggc
acagtcaggaaagctggagctttagctgtgaagaacttcctggttcataagaaaaataag
aaggtggagcttgcaaccaagcgcaagtggaaacagtactgggtgtctctaaaaggctgc
accctcttcctgtatgaatctgatggccgctctgtaattgaccataacagcgttgctaaa
catgccttgtgggtggagaacagcatcgtgcaggccgtgcctgaacaccccaagaaagac
tatgtcttctgcctcagcaactcaatgggagatgcatttctattccagacatcaggccaa
accgaactggagaactggatcacagcaatccactctgcgtgcgccacggctcttgcccga
cagcaccacaaggaggacaccgttaggctgctccgaaccgagatccgcaaactggagcag
aagattgacatggacgagaagatgaagaagatgggagatatgcagctttccactgttact
gatgcgaagaagaggaagaccatactggagcagattttcttgtgggagcagaacttggag
cggttccacatagatctcttccgctgtcgctgctacctggccagtctgcaaggcggtgaa
cctccaaatcccaaacgcctcctgggctttgcttcccgtcccaccaaaatggccatgggt
cgccttggcatcttctctgtgtcttccttccatgcattggtgtctgcccggactgcagct
agcataagcaagcgaaaccagcccgtgcagcggaccttcagtaaacggcgtagccgcttc
tcctccctctggggtctagacaccacctccagaagaaagaccaaaggaaatccttcagtt
cagcaggtgtttaataatgggacagagcctgtaagaaaaccgttggagtgcatgtttgaa
gactctgccagtgagatatctaaaaaaacagaagactccatgaaaactgttcctcagcaa
agcgtagacagtgatatttgggttccagattacctgaagccctcctgggtgagtctgcca
aacaatcagccagtcctggccatcgtgcagcccggtgagacaacattggatgtcctgaac
agtgtctgcaagacccatcagattgagccctcggttcactacttacgtgtgaaggtgtgg
gtcaacaaccagttgctttactatgttcccaaatctgaagaagagatctctgatttgatc
tacaaagagattgagatttgcctcagagctaccaaggtgatttgctttgacaaagcagaa
tctagcaccatcggatacggcttcactgtgggagctacagatgaggatgctgtacaacga
cttcatattaccgaagttaaaccaggaggactggctttagctaaaggtttgaaagaagga
gatgagattcaattcctcaatggcaaatctgcctctgcccttcagctggatgatttgagg
gcagcgtttagagaccacatgcttagcctgagtgtcagcactgtaccccagcaggaccct
aagatgctgtgcttctgcccacctcatcgcttcgatggagaacaagacacaaccacagac
atcttttcccagagtcaagagaacatcctggatgaggtgtcaggtttgactgtagagagc
ctagatgagagtttggaagagggatctctgttaaccctgcagagccccggagatcatcgt
gaagatagaacattaatggcagctggacagaagagcacggagcaggtcactgctttctgc
cgcagtctccatgatttgaatcccctggagtgcccaatgtcgtcctcctcctcatcttct
tcgtcgtccctgtcaccgagcccagtgtcagcattggcgcctgctgcgggcaccgccacc
cagagacagctttcccacgcagacaagctacgcaaggtcatcagtgaattagtggagacg
gagaagacgtatgtcaaggacctgcactgtctcatagagttctacttgaaacctttacag
aaagagagtttcctaacacaggatgagctggatgttttattcggcaatcttgaagagatg
gtggagttccagttggagttcctgcgaacacttgaagatggaatcaaactggtgccagat
ctggacagactggaaagggtggaccagtttaagaaggtgctgttctctttgggtgggtca
ttcctgtattatgctgatcggttcaagatctacagtgctttttgtgcgagccacacaaag
gtcccaaaagtcctggctaaagccaaaactgacccagagttcaaagctttcctggccgag
agaaaccccagacagcaacattcatccaccctggagtcttacctaatcaaacccatccag
agagtgctgaaatacccgctcctgctcagggagctctactctctcaccgacccagacagt
gaggagcactaccacctggatgttgcaatgaaggccatgaacaaagttgcgagtcacatc
aatgagatgcaaaagcttcatgaggagtatggagctgtttttgatcagctcatcaatgag
cagacggcagataacaaagaggtgcttgatctctcgatgggggatcttctgctgcattca
acagtggtgtggatgaatgctccagcctcttttggcaagagcaaaaaggacccagaatta
gctgcttttgtgttcaaaactgcagttgtgtttgtctacaagaactgctccaagcacagg
aaaaaaattgggggatctcatcgtacatctgtgagtgaggacagggatcattttcgcttc
cgacacatgattgcaacagactccctgcaagtccggactcctgcaagctctcaagccact
gcagtgtgtgaacttgtccacaccaggtctgaatctgaaggaagaccagaaaaaaccttt
caactgtgctgcagttctccagagagtaaaaaggacttcttaaaagcagtccagtctatt
cttagggagaagcaacggcgactgcttctgaagacaaaatctatgtctcccaatcagaag
tacgtcccgtttggtggcaaacgcctgagcgccctcaaaggtgcaagggctgccatgaac
agagcagcatctgctccatcacgtactctgactcgcagaagcctgatgaggaaccgcatc
attatcgatgctgacctggttttccacggcaacaacaacagcagtgacaatgccaacttc
tcccaccactcatcctattcttcctcaaactcgccaccctcccatcacgaacctcatccg
tctcacgaacttcaggcagaagacacagatcgttgggtggaagagcagtttaacttgggg
cgctatgaagaccagtgcgaaggcatcgacgacagacaggtgaaggagacggacatcttg
agtgatgacgatgagtactgtgactctgtccgatcccttccagctgaaccggactcccta
gaggcaggggtggaaggactgaacttgcacagcaaagaggtcaacttgaatagaaagatg
gagtctaaaagtgaaatcgacaaaagtgtgaaagtggacagaacaaagcagagagatgat
tcagattccttcacatcctgcaacctctctgtctcccgttgttcaaagctaactcctttg
aagcagcagtgtgctgtggagggggccacaagcaatgaccacgacgtaatctgggtgcga
cgggacgacttcactaaagggtgcaacagtgatgttttttga
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