KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124879956
Entry
124879956         CDS       T08099                                 
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2) isoform X1
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04010  MAPK signaling pathway
gmu04060  Cytokine-cytokine receptor interaction
gmu04150  mTOR signaling pathway
gmu04210  Apoptosis
gmu04217  Necroptosis
gmu04350  TGF-beta signaling pathway
gmu04620  Toll-like receptor signaling pathway
gmu04621  NOD-like receptor signaling pathway
gmu04622  RIG-I-like receptor signaling pathway
gmu04625  C-type lectin receptor signaling pathway
gmu04920  Adipocytokine signaling pathway
gmu05132  Salmonella infection
gmu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124879956 (tnfa)
   04350 TGF-beta signaling pathway
    124879956 (tnfa)
   04150 mTOR signaling pathway
    124879956 (tnfa)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    124879956 (tnfa)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    124879956 (tnfa)
   04217 Necroptosis
    124879956 (tnfa)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    124879956 (tnfa)
   04621 NOD-like receptor signaling pathway
    124879956 (tnfa)
   04622 RIG-I-like receptor signaling pathway
    124879956 (tnfa)
   04625 C-type lectin receptor signaling pathway
    124879956 (tnfa)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    124879956 (tnfa)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124879956 (tnfa)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124879956 (tnfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:gmu04052]
    124879956 (tnfa)
   00536 Glycosaminoglycan binding proteins [BR:gmu00536]
    124879956 (tnfa)
Cytokines and neuropeptides [BR:gmu04052]
 Cytokines
  Tumor necrosis fators
   124879956 (tnfa)
Glycosaminoglycan binding proteins [BR:gmu00536]
 Heparan sulfate / Heparin
  Cytokines
   124879956 (tnfa)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 124879956
NCBI-ProteinID: XP_047240774
LinkDB
Position
13:6182694..6198507
AA seq 242 aa
MESEYKVMLDVNASIEAGDQSSSDVKKFQMSRLTMALTTFTLCLATVAALFLFSNARVKS
EGLDEDSFDLHHALRQITNRRAAIHLEGEYDPTIRTSVKWMSQVDQSHSQGGLELKDNEI
LIPQNGLYFVYSQVSFRVSCSSRDADDITSMVHLSHTVKRWSSSFGSKGEQSYQTILHSV
RTACQITASADPDSVGSWFSAVYMGAVFNLRRGDRLKTVMEEKMLENLEDESGKTFFGVF
AL
NT seq 729 nt   +upstreamnt  +downstreamnt
atggaaagcgaatacaaggtaatgctggatgtcaatgcgagcatagaagcaggtgatcag
tcatcctcagatgtcaaaaaatttcagatgtcaagactcaccatggccttgacaactttc
actctctgcctcgctactgttgctgctctttttctcttctccaatgctcgtgtcaagagc
gaaggactggatgaggacagctttgatcttcatcatgcattgaggcaaattacaaaccga
agggcagcaattcatttagaaggagaatacgaccccaccataaggacatcagtgaagtgg
atgagtcaagtggaccagtcacactctcaaggaggtctagaactcaaagacaatgagatt
ttgattcctcagaatggcctctattttgtttacagccaagtgtctttccgagttagctgc
agcagcagggatgctgatgacattacctccatggtccacctgagtcacacagtgaagcgc
tggtccagctcatttgggagtaagggagagcaatcctatcagaccattctgcactctgtt
cgtactgcctgtcagattacagccagtgcggatccagattcggttggaagctggttctct
gcagtgtatatgggagcagtatttaatttaaggaggggggacagactgaagaccgttatg
gaagagaaaatgctggagaatctggaggacgagtcagggaagactttttttggtgtgttt
gctttgtga

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