KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124882742
Entry
124882742         CDS       T08099                                 
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
  KO
K02084  apoptotic protease-activating factor
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04115  p53 signaling pathway
gmu04210  Apoptosis
gmu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    124882742 (apaf1)
   04115 p53 signaling pathway
    124882742 (apaf1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124882742 (apaf1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz APAF1_C Beta-prop_EML_2 NB-ARC EIF3I Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd APAF-1-like_WHD Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 CARD Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_EIPR1 RMC1_N Beta-prop_NWD2_C PEP5_VPS11_N Beta-prop_WDR35_TULP_N WD40_like Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 CARD_2 PROPPIN Beta-prop_SPT8 WD40_RFWD3 WDR54 Beta-prop_Nup120_160 AAA_16
Other DBs
NCBI-GeneID: 124882742
NCBI-ProteinID: XP_047245219
LinkDB
Position
17:20910404..20969749
AA seq 1260 aa
MALEERTRSSLLRLRLKLEQDIKPQYLMDHMISDGVITLDEEEKIRIQPTRKDQAAALIE
LLLKRDNCCFISFYNALVKETYDDLAKLLYADLPDVSRDGRKSSAESSISSVQIVLSEGG
VPQRPVVFVSRPELLNQVRKKLYLLQEDAGGWVTVFGMAASGKSVLAAEAVRDHGLIQDC
FPQGVHWLSIGQLDKPDLLVKVQSLCFRLDQNLDSQSHQRPPTSLDEAKERLRFLMLRRY
PRSLLILDDIWDSSVLKVFDIHCRILLTTRNRSLADSVSGPKYEVEVESRLDDKKALEIL
ALYTKKNPSMLPEEARSIVRECKGSPLVVSLIGALLNEKPNRWPYYLRQLQQKQFKRIRK
SSSYDYDALDQAMAASIEVLPDEHRELYKDLTVLENDVKIPAKVLCVLWDLEPEEVEDIL
QEFVNRSLLFVDCNSKPNLYYLHDLQLDFLAEQNRDQIESLHGKVVRQYQHHYREASPVS
GDKECLYWIRFLPYHMAKANMSQELYSLMLSLDWVSIKAKIMGTAHLINDYVEYGPILDK
ENSELRSQFQEFLSLSGHHLEQRPFPDVLQLALSQPHSSGVYRQARQQALNRANRGKLYF
ELINKSSVENLSRLVIHPHQGSIYSARFSHDGTKVASCGASKTLKVFKSTSGEKLTEIQA
HDDEVLCCAFSPDDHLIATCSSDRKVKVWNIEQGKLLRVFEDEHEEQVNHCEFTNTVRRL
LLATCSNDSCLNVKIWNLNKPSSQNTMFGHFKPVNHCCFSPDDSYLSTSSNDGTVKLFQV
STANEWKTIDVKTFFSESDDEEVLVKCSTWTADGTRIICAARNAALVFDVQTSDMLLEIK
TNRLSTVQYCHTCPTSNLLALAFSNYAVELWDLEENKKRADCSGHLSWVQRVQFSNDGSQ
LLSCSDDQTVRLWETEKVHTSSAICLKRDSDVLFNEEEIIVSAADNCNRLQVRDGRTGSV
RFQSEELPFRIRCTCMCRNPSAVSLGQENGNVQVLELPSGKLLATLLGHTKTVLHCQFCQ
NGQTLITSSEDTTIRVWKWKSGECKVLRGHKEQVRCFSLLSDSTNDSKLLSWSFDGTVKV
WDIESGERLQDIEAHQGAILSCHVSLDRCLFATTSADKTAKLWSCDTWQCAFTLTGHQEC
VRCCRFSWDSKRLATGDDNGEIRIWGVKDGSLLKICSRESKDGMDSLHGGWVTDLHFSPN
NSVLVSTGGYIKWWNVARGEALQTFYPTGCALKKIHVSPDFSTFVTIDNIGILYILNRVA
NT seq 3783 nt   +upstreamnt  +downstreamnt
atggccctggaggagcggacacgaagcagtctgctgcgcttacgcctcaagctggagcag
gacatcaaaccccagtatctcatggaccacatgatcagtgatggtgtgataacactggat
gaggaagagaagatcaggattcagcccaccagaaaagaccaggctgcagcactgattgag
ttgttgctcaagagagacaactgttgctttatttctttctacaacgcgctggttaaagaa
acatatgacgatctggccaaactgctgtatgcagacctaccggatgtctcacgcgatgga
cgtaagagctccgctgagagctccatatcttctgtccagattgtgcttagtgaaggcgga
gtcccacagaggcctgtggtgtttgtcagcaggccagagttgctgaatcaggtcaggaag
aaactttatttgctccaggaagatgctggtggctgggttacagtctttggtatggctgcg
tcaggaaagtctgtgctcgccgctgaggccgttagagaccatggactcatccaagactgt
tttcctcagggggttcactggctgtccatcggtcagctagacaaaccagacctactggtg
aaggtccagtcattgtgttttcgtctggatcagaacctggattcccagtcgcaccagcgg
ccgcccacctccctggatgaagcaaaggagcgcctgcgcttcttgatgctgcgcaggtat
cccagatctctgctcattcttgatgacatctgggatagctcagtgctgaaagtgtttgat
attcactgccgaattcttctgaccaccagaaatagaagccttgctgattctgttagcgga
cccaaatatgaggtggaagtagaaagtcgtctggatgataaaaaggcgctggagatcctg
gccctgtacacaaaaaagaatccaagcatgttacctgaggaggctcgcagcattgttagg
gaatgtaaaggctctcctctggtggtttctctgatcggcgctctgctcaatgagaaaccc
aaccgttggccttactacctccgccagcttcagcagaagcagtttaagcgcatcaggaag
tcgtcgtcttacgactacgatgccttggatcaggccatggctgcaagcatcgaggtttta
ccagatgagcatcgggagctctacaaagacctgactgtgctggaaaacgacgtcaaaatt
cctgctaaggtgctgtgtgttttgtgggatctggagccagaggaggtggaggacattctc
caagagttcgtcaacaggtctctgctttttgtagactgcaacagcaaacccaatctgtac
taccttcatgacctccagctggacttcctggcagagcagaaccgagatcagatagagagt
cttcacggtaaggtggtgcgccagtaccagcatcactacagagaggcttctcccgtgtct
ggagataaggaatgcctttattggatcagatttctgccctatcacatggccaaagccaac
atgtcccaggagctctactcgctcatgttgtcgctggactgggtcagcatcaaggcaaag
ataatgggtacagcccacctcatcaatgactatgtggagtacggacccattctggacaaa
gagaacagtgaactgcgcagccagttccaggagtttctgtcgctgagcggccaccacctg
gaacagcgtcctttccctgacgtcttgcagctcgctctgtctcagccacactcttcgggg
gtctacagacaagctcggcagcaggcactaaacagggccaatagggggaagctttacttc
gaattaataaataagagcagtgtagaaaatctgtcccgtttggtgatccaccctcaccag
ggctccatctactccgcccgcttctcccacgatgggaccaaagtcgcttcttgtggagcc
agcaagacactgaaggtatttaaaagtacctcaggtgagaagctcacagagatccaggcc
cacgatgatgaagtgctctgctgtgccttctcccctgatgaccatcttatagcaacctgc
tcaagtgacagaaaagtcaaggtctggaacatagagcaaggcaagctgctgagggtcttt
gaagacgaacatgaggagcaggtcaaccactgtgagtttactaacacagtacggcgcctc
ctactggccacgtgctccaacgacagctgcttaaatgtcaagatttggaatttgaacaag
ccgtcctcccagaacaccatgtttggtcactttaagccggtgaaccactgctgtttctcc
cctgatgatagttatttgtccacttcctccaatgacggcaccgttaagttgttccaggtg
tcgacagccaacgagtggaagacaatcgatgtgaagaccttcttttcagaaagcgacgat
gaggaggttcttgtcaagtgcagcacctggaccgctgacggcacgcggatcatatgcgcc
gccagaaatgctgctttggtgtttgatgtccagacgtcggacatgttgctggagattaag
acgaatcgtctgagcacggtgcaatactgtcacacctgtcctaccagtaacctgctggca
ctagcattctcaaattatgctgtggagctgtgggatcttgaagaaaacaagaagagggcc
gactgcagcggccacctgagctgggtccaacgtgttcagttctctaatgacggctcacag
ctgctctcctgctccgacgaccagacagtcaggctatgggagaccgagaaggtccacaca
tcctcagccatctgtctgaagagagattcagacgttctctttaatgaagaggaaatcatc
gtgtcagctgcagacaactgcaacagactccaggtgcgggatggcagaacagggtccgtg
cggttccagtcagaggagttgccgtttaggatccggtgtacttgtatgtgcaggaatccg
tctgcagtgtctctgggacaagagaacggaaatgtgcaggtgttggagctgccctctggg
aagcttttagccactctgctgggacacactaagactgtgcttcactgccagttctgccag
aacggacaaacactcatcacctcatccgaggacaccaccatcagggtgtggaagtggaaa
tcaggtgaatgtaaagtacttcggggtcacaaggagcaagttcggtgcttctctttgctc
tccgactcaacaaatgactcaaaactgctctcctggtcctttgatggaactgtgaaggtg
tgggacattgagagcggggagaggctacaggacatcgaggctcatcagggagccattctg
tcctgtcacgtctcgctagacagatgtctctttgcaaccacctctgctgacaagaccgct
aagttgtggagctgcgatacgtggcagtgtgccttcacgctgactggccaccaagagtgt
gtcagatgctgccggttctcctgggatagcaaacgcctcgccacaggagacgacaacgga
gagatccggatctggggtgttaaagatggctctttactgaagatctgttccagggaaagt
aaagatggtatggactctctacatggaggctgggtgactgatctgcacttctccccaaac
aactctgtgctcgtttcaaccggaggctatatcaagtggtggaacgtggcaagaggtgaa
gccctgcagacgttctatccaacaggatgcgctctcaagaaaatccacgtgtcgcccgac
ttctccacctttgtcaccatcgacaacatcggcatcctctacatccttaacagggtagca
tga

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