Glycine max (soybean): 100782529
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Entry
100782529 CDS
T01710
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100782529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100782529
Spliceosome [BR:
gmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100782529
Complex C
U5 SnRNP specific factors
100782529
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFL1
EFG_III
MMR_HSR1
Roc
EF-G_D2
Ras
Septin
K1-lyase_C
Motif
Other DBs
NCBI-GeneID:
100782529
NCBI-ProteinID:
XP_003549705
UniProt:
I1MTZ8
LinkDB
All DBs
Position
17:8282985..8288964
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AA seq
988 aa
AA seq
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MDDSLYDEFGNYIGPEIESDQDSDRDSDADADDNPDDQSDGGGTAHSDGEGPSNGWMTTI
SDELENQVVLAEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVRNIKFEVGVKDS
STYVSSQFLLGLMSNPTLVRNVALVGNLQHGKTVFMDMLVEQTHHMSTFDSQSEKHMRYT
DTRIDEQERRISIKAIPMSLVLEDSNSKSYLCNIMDTPGHVNFSDEMTAALRLADGAVLI
VDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLEVINTH
ISAASSIAGGVQVVDPVAGNVCFASATAGWSFTLQSFAKLYGKLHGIPLEANKFASRLWG
DYYFHPDTRTFKKKPPASGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVTLSN
AAYRLNVRPLLRLACSSVFGPASGFTDMLVQHIPSPRDAAIKKVDHIYTGPKDSSIYKAM
AQCDSYGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQAVRVLGEGYSPDDEEDMTVK
EVTKLWVYQARDRMPVAEAPPGSWVLIEGVDASIMKTSTLCNVDYDEDVYIFRPLQFNTL
SVVKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDLR
ELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIENGVV
STDWSKKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVNKDLMNAVKDS
IVQGFQWGAREGPLCDEPIRNVKFKIVDAKIANESLHRGSGQIIPTARRVAYSAFLMATP
RLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFET
DLRYHTQGQAFCMSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKGMSE
DVSINKFFDEAMMVELAQQAADLHQQMM
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcttgtacgacgagttcggcaactacatcggccccgagatcgagtccgac
caggactccgaccgcgactccgacgccgatgccgacgacaaccccgacgaccaatccgac
ggcggaggcaccgcccactccgacggcgagggcccgagcaacgggtggatgacgacaatc
tccgacgagctggagaaccaggttgtgttagcagaggacaaaaagtactaccccaccgca
gaagaggtgtacggcgaggacgtggaaaccttagtcatggacgaagacgaacagcccctg
gagcaacctatcataaagcccgtgagaaacataaaattcgaagtgggcgtcaaggactcc
tccacctacgtgtcctctcagttcctcctgggtctcatgtcaaaccctactttggttcgc
aatgtggcgctggtggggaacttgcagcacggaaagacggtgttcatggacatgctcgtg
gagcagacgcaccacatgtccacgtttgattcacagagtgagaagcacatgcggtatact
gataccagaattgatgaacaggagaggaggatttcgatcaaggccattcccatgtcgctc
gtgctcgaggatagcaattccaagtcctatttgtgtaacatcatggacacgcctggacat
gttaatttctccgacgagatgaccgcggcgttgcggcttgctgatggcgctgtcttgatt
gtagatgctgctgaaggagtcatggtaaacacggagagggcgatacgtcacgcaattcag
gagcggttgccgattgttgttgtaattaataaggttgacaggcttataactgagcttaag
ttgccgccaaaggatgcttatcataaactaaggcatactttggaagttattaatactcat
atatctgctgcctcctcgattgctggtggtgttcaagttgtggatccagttgctggaaat
gtttgttttgctagtgctactgctggatggtcctttacattgcagtcgtttgctaagttg
tatgggaagctgcatggaattcctttggaggctaataaatttgcttctcggctttgggga
gattattattttcatccggataccagaaccttcaaaaagaaaccccctgccagtggaggg
gaacgatcttttgtggagtttgtgctggagccactttacaagatatatagccaggtgatc
ggggaacataaaaagagtgtagagacaacacttgctgaacttggagtcactctaagtaat
gcagcctacagattaaatgttaggcctttgctaaggttggcttgtagctcagtttttggt
ccagcttcgggtttcaccgatatgcttgttcagcatataccttctccgagggatgctgca
attaagaaagttgatcatatatatactggtcctaaagactcttctatttacaaagccatg
gcacagtgtgattcttatggccccctaatggttaatgtgaccaaattgtatcccaaatcc
gattgcagtgtgtttgatgcctttggtagagtttatagtggtaagatacagacaggacag
gctgtacgtgttctaggagaaggatactcgccggatgatgaggaggacatgactgtaaaa
gaagtaactaagttgtgggtgtatcaagctcgtgataggatgccagtagctgaggctcct
cccggttcttgggttctaattgaaggtgtggatgcttcaatcatgaaaacttctactctt
tgtaatgtggattatgatgaagatgtatatatattccgccctcttcagttcaatacactg
tcagtggtaaaaacagctactgagccattaaatccaagtgagttgccaaaaatggtggag
ggcctgaggaaaataagcaagagttatcctcttgcagttactaaagtcgaggaatctggg
gagcacactattttagggactggtgagctgtacttggattcaattatgaaggacctgaga
gagctctattccgaagtagaagtcaaggtagcagatcctgttgtatcattttgtgaaact
gttgttgaatcttcctcaatgaaatgttttgccgaaacaccaaacaagaagaataaaata
actatgattgccgagccgctagaaagaggtcttgcagaggacatagagaatggtgttgtt
agcactgactggagtaaaaagaaactaggtgaatttttccagactaaatatgactgggat
cttcttgctgcacggtcaatctgggcatttggccctgataagcagggtcccaatattctg
ttagatgacacccttccaactgaagttaacaaggatctgatgaatgccgtgaaggattcc
attgttcagggatttcagtggggtgcacgagaagggcctctctgtgatgagcccatcaga
aatgttaaattcaagattgttgatgcaaagattgctaatgagtcactccatcgggggtct
ggccagatcattccaacagcacgacgagtggcctattcagctttcctcatggctactcct
cggctcatggaaccagtatattatgtggagattcaaacaccaatagattgtgtgtctgca
atttacactgtattatctcgaaggcgtgggcatgttactgctgatgttcctcagcccggc
accccagcttatattgttaaggcatttttgcccgtgatagaatcttttggatttgaaaca
gacttgagatatcatacgcaaggtcaagcattttgcatgtcagtttttgatcattgggct
attgttcccggagatcctctggataaaagcattgttttgcgcccacttgaaccagcacct
atacagcatcttgcccgtgagtttatggtgaagacaagacgtagaaagggaatgagtgag
gatgtgagcataaataagttcttcgatgaggctatgatggttgaactggcacagcaggca
gcagaccttcatcaacaaatgatgtga
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