Glycine max (soybean): 100797225
Help
Entry
100797225 CDS
T01710
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
gmx
Glycine max (soybean)
Pathway
gmx04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100797225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmx03000
]
100797225
Transcription factors [BR:
gmx03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100797225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Mtb12_C
Motif
Other DBs
NCBI-GeneID:
100797225
NCBI-ProteinID:
XP_006576978
LinkDB
All DBs
Position
3:39695411..39701232
Genome browser
AA seq
517 aa
AA seq
DB search
MTNNHNHCVPDFDIQMDHDHEYPILTPSALPRQKKPSIADDDIMELLWHNGQVVVQSQNQ
RSLRKLPPVTNSHDASPAGPSMTREIRPLVENFNQHLFMHEGEMASWLHYPIDDDEPALD
QSFGADFLYSPPTTANNSSFMQTLGHTSQLTELRPMSANPRPPIPPPRRPEQRTPNFAYF
SRHNTRAAEPSVKAAARESTVVDSCDTEAAASRVSETVRSAAEGGAGVAAPSTSAGGGRS
TMMYDLTMTSSPGGSSSCDEPVQVAAAEEDRKRKGREAEEWECQSEDVDFESEAKKQVCG
STSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAISYLKSLQLQ
VQMMSMGCGMVPVMFPGIQQYMPAMGMGVGMGMGMEMGMNRPVMPFPNMLPGSALPAATA
AAAHLGPRFSMPPFHMPHVPAPDSSRMQAANQSDNNMVTSAGPPDPNQSRIPNFTDPYQQ
YLGPHQMQFQLIQNQAMNQPNVSKPSNNGGPANPENH
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaccaataatcacaatcactgtgttccagatttcgatattcaaatggaccacgaccac
gaataccctattctcacgccttcagccttacctcgccaaaagaaaccctccattgcagac
gacgatatcatggagctgctatggcacaacggccaggtcgtggtgcagagtcagaaccaa
cgttctctgagaaaacttccgccggtgaccaactcccacgacgcctctcccgccggtcct
tcaatgacgagagagattcgaccgctggtggagaatttcaatcagcatctcttcatgcac
gaaggcgaaatggcttcgtggcttcactatcctatcgacgacgacgagcctgcgttggat
caaagcttcggcgccgattttctctattctccgccgacgacggctaacaacagcagcttc
atgcaaaccctcggccacacgtctcagctcacggagctccggccgatgtcggcgaatcca
cggcctccgattccgcccccgagaaggccggaacagaggacgccgaacttcgcgtacttc
tcgaggcacaacacgagagccgcggagccgagcgtgaaggccgccgcgagggaatccacg
gtggtggattcgtgcgatacggaggcggcggcttcgagagtttcggagacagtaaggagc
gcggcggaaggaggtgccggcgttgcggcgccttcgacgagtgccggcggtggaaggagc
acgatgatgtacgatttgacgatgacgtcatcgcctggcggttcgagtagctgcgacgag
ccggttcaggtagcggcggcggaggaggatcggaagcggaagggacgggaggcggaggaa
tgggagtgtcagagcgaggatgttgattttgaatcagaagcaaagaagcaagtttgtgga
tcaacatctacaaagagatcccgtgctgccgaggtccataatctctctgagaggaggcgt
cgcgatcggattaatgaaaagatgaaagctctgcaagaacttatacctcgttgcaataag
tcggacaaagcttcaatgctggatgaagcaatttcgtacttgaagtcattgcagttacaa
gtgcagatgatgtccatgggatgtggaatggtacctgtgatgtttcctggaatccagcag
tacatgccagcaatgggaatgggggttggaatgggtatgggtatggaaatgggaatgaac
agacctgtaatgccgtttcccaatatgttacctggttcggctttgccagcggcaactgca
gctgctgctcatttgggaccaaggttttccatgcctcctttccacatgccccatgttcct
gctcctgattcatctagaatgcaagcagcaaatcagtcagataataatatggtcacgtca
gctggtccacctgatccaaatcagtcacgtatcccaaacttcactgatccttatcaacaa
tatcttggtccccaccagatgcagttccaattaattcagaatcaggcaatgaaccaacca
aatgttagcaagccaagtaacaatgggggccctgcgaatccagaaaaccattag
DBGET
integrated database retrieval system
