Entry |
|
Name |
(RefSeq) transcription factor PIF3
|
KO |
K12126 | phytochrome-interacting factor 3 |
|
Organism |
gmx Glycine max (soybean)
|
Pathway |
gmx04075 | Plant hormone signal transduction |
|
Brite |
KEGG Orthology (KO) [BR:gmx00001]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100804665
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100804665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:gmx03000]
100804665
Transcription factors [BR:gmx03000]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100804665
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:43897964..43900760
|
AA seq |
517 aa
MIQKMFDPSRSGMTRSSSHVASIYDNDFLELVWENGEVVVRGGSSNRSRKTNDERIHEDA
SINKRTRLNPLLYSLEDHFPPQRDSDMSTSHQSNGQDSCGQSSQSKLHEEFANLLKPVSI
GNNHLQQCLPSSPLKKQRTVDSTQTPPTPKVNFSNFSIPAVFLKSTTHQGNSATQQTNNH
SSPARMEEIIEARKVEQSVKESHGFQKQTSLTVERSTKLPTPPVDEHSEAVGHNCGVLGI
HRSQGQLRCDQTSTSEALIRAKAKAYNNNANMCHEPLLASSSVCSLGASNDPNLGLRKHE
DTETYLSDNDGEPEDMVKQDRDGNRVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNC
NKVDKASMLDDAIDYLKTLKLQLQIMSMGNGLWPLMMLPAATTAHHMNPQLGMGFRPPQL
PIPPSLSAITDNRLQMFGCFPNQIPPMPAMPHAPFFPIIANSATQPHLANTTNLAEHLAA
SLHGNATKLAPPSQVSFQQHSCTSTPTLSTPFIFPQK |
NT seq |
1554 nt +upstreamnt +downstreamnt
atgattcagaagatgtttgaccccagccgttctggtatgacaagaagctcctcccatgta
gcctccatttatgacaatgatttccttgagttggtgtgggaaaacggtgaggttgttgta
cgaggaggttcatcaaacagatcacgaaagacaaacgacgaaagaatacatgaagatgcc
agcattaacaaaagaacaaggttaaacccattattatactcacttgaagatcactttcca
cctcaaagggactctgacatgagcacttcacaccaaagcaatggccaagattcgtgtggt
caatcctcccaaagcaagcttcatgaagaatttgcaaacttacttaagcccgttagcata
ggcaataatcacttacaacagtgcttaccttcatctccgctcaagaaacaaagaacagta
gattcaactcaaacaccaccaacaccaaaagtgaacttctccaacttttcaatacctgca
gtgtttctcaaatctactactcatcagggaaacagtgcaacccagcagacaaacaatcat
tcgtctccagcaagaatggaggagatcattgaagcccgcaaggttgagcaatcagttaaa
gaatcacatggttttcaaaagcaaacatccttaactgttgaaagaagcaccaaattacca
accccaccggttgatgaacactctgaagctgttggtcataactgtggtgttcttggaatt
cacagatcccaaggtcaactacgttgtgaccaaacctcaacttcagaagcacttattaga
gccaaggcaaaagcttataataataatgctaacatgtgtcatgaaccgttgctagcatct
tcttctgtgtgctcgcttggagcctccaacgacccaaaccttggtctcaggaaacatgag
gacactgaaacgtatttaagtgataatgatggagagcctgaagatatggtaaagcaagat
agggatggtaacagagtcaggagaatcaggaaccctgtggttcataacttatctgaaaag
aagcgaagagaaaaaatcaacaagaagatgcgtacattgaaagagctcatacccaattgc
aataaggtggacaaagcatcaatgctagacgatgccatcgactatctgaagaccctaaag
cttcagctacagataatgtcaatgggaaatgggttatggccacttatgatgctaccagct
gcaaccacggcgcatcacatgaatcctcagctaggaatgggattcaggccaccacaacta
cctattccaccatcactttctgctatcacagacaacagacttcagatgtttggttgtttc
ccaaaccaaataccacccatgccagcaatgcctcatgcacctttcttccctatcattgca
aattctgccacacaaccacacttggctaacaccaccaacttggcagaacatttggctgca
tctctgcatggaaatgcaacaaagctagcgccaccaagtcaggtttcctttcaacaacac
agctgcactagtactcctacactatctacccctttcatttttccacaaaaatag |