Geomonas diazotrophica: KP003_05760
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Entry
KP003_05760 CDS
T07937
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
gnt
Geomonas diazotrophica
Pathway
gnt00020
Citrate cycle (TCA cycle)
gnt00270
Cysteine and methionine metabolism
gnt00620
Pyruvate metabolism
gnt00630
Glyoxylate and dicarboxylate metabolism
gnt00680
Methane metabolism
gnt00710
Carbon fixation by Calvin cycle
gnt00720
Other carbon fixation pathways
gnt01100
Metabolic pathways
gnt01110
Biosynthesis of secondary metabolites
gnt01120
Microbial metabolism in diverse environments
gnt01200
Carbon metabolism
Module
gnt_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gnt_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gnt_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KP003_05760 (mdh)
00620 Pyruvate metabolism
KP003_05760 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
KP003_05760 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
KP003_05760 (mdh)
00720 Other carbon fixation pathways
KP003_05760 (mdh)
00680 Methane metabolism
KP003_05760 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
KP003_05760 (mdh)
Enzymes [BR:
gnt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
KP003_05760 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
QXE87909
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Position
1320472..1321425
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AA seq
317 aa
AA seq
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MARKKIALIGGGQIGGVLAQLAALRELGDVVMFDIVEGLPQGKMLDIAEVGSVDGFDCCL
KGTNSYEDIQGADVVIVTAGLPRKPGMSRDDLIEVNSKIMTSVAEGIKAHAPNSFVIVIS
NPLDAMVTLCQKITGFPYNRVIGQAGVLDSARFKTFIAWELGVSVKDVNAMTLGGHGDDM
VPLVRYASVNGIPVMELLEKKYKDKAKAKEVMDAMVKRTRGAGGEVVALLKTGSAFYSPA
SSAICMAESILKDQKRVLPTCAYLNGEFGVKGFYVGVPCVLGENGVEAILEFELDAEEQA
MMDKSVAAVKELVGSMK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtaagaaaatcgcacttatcggtggtggtcagattggcggcgtacttgctcag
cttgcagctctgcgcgaactgggtgacgtggtgatgttcgacatcgtggaaggcctgccg
cagggcaaaatgctggacatcgccgaggtaggttcggttgacggcttcgactgctgcctg
aaagggaccaacagctacgaggacatccagggcgccgacgtggtcatcgttaccgcaggt
ctgccgcgcaaaccgggcatgagccgtgacgacctgatcgaggtcaactccaagatcatg
acctccgttgccgaggggatcaaggcccacgcgccgaactccttcgtcatcgtcatctcc
aacccgctcgacgcaatggtcaccctgtgccagaagatcaccggcttcccctacaaccgc
gtcatcggccaggccggcgtcctcgactccgcacgcttcaagaccttcatcgcctgggaa
ctgggcgtttccgtgaaggacgtgaacgcgatgaccctgggcggccacggcgacgacatg
gtgccgctggtgcgctacgcctccgtgaacggcatcccggtcatggaactgctcgagaag
aagtacaaggacaaggctaaggccaaggaagtcatggacgccatggtcaagaggacccgc
ggtgcgggcggcgaggttgtcgccctcttgaaaaccggttctgctttctactccccggct
tcctccgccatctgcatggcagagtccatcctcaaggaccagaagcgcgttctcccgacc
tgcgcatacctgaacggcgagttcggcgtgaaaggcttctacgtcggcgttccctgcgtc
cttggcgagaacggcgtcgaggcgatcctcgagttcgaactggatgccgaagagcaggcc
atgatggacaagtcggttgccgccgttaaggaactcgttggttccatgaagtaa
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