Geomonas diazotrophica: KP003_10255
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Entry
KP003_10255 CDS
T07937
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
gnt
Geomonas diazotrophica
Pathway
gnt01501
beta-Lactam resistance
gnt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gnt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KP003_10255
01503 Cationic antimicrobial peptide (CAMP) resistance
KP003_10255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gnt02000
]
KP003_10255
01504 Antimicrobial resistance genes [BR:
gnt01504
]
KP003_10255
Transporters [BR:
gnt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KP003_10255
Antimicrobial resistance genes [BR:
gnt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KP003_10255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QXE88743
LinkDB
All DBs
Position
complement(2356514..2359675)
Genome browser
AA seq
1053 aa
AA seq
DB search
MSRFFINRPIFAWVIAIGVMLAGLLAMKSLPVSQYPPIAPPQISVNAMYPGASAQTVQDT
VTQVIEQKMNGIDNLLYMSSTSDSAGAVSINLTFRAGTDPNIAQVQVQNKLQLATPLLPQ
VVQKQGIQVVKSTRNFLMIVGIVSEDGSLNRYQLTDYMVSNVQDIVSRIEGVGEVTVFGS
QNAMRIWLNPDKLNNYKLTPNDVSNALQAQNAQVSAGQFGGMPAMQGQQLNATITARTLL
QNQEQFEEIVLRTNSDGSTVKLRDVAKIDVGTENYDTLARYKGKPVAAMALRLAAGANAL
DTADRVKTKMVELEKFFPAGAKVVYPYDTTPFVKISMEEVVKTLMEAVCLVFIIMFLFLQ
NIRATLIPTIAVPVVLLGTLGVLFAAGFSINTLTMFALVIVIGLLVDDAIVVVENVERIM
TEEGLSPHDATVKSMGQITSALWGIATVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMIL
SVLTAQILTPALCATLLKPVVKGHEPCESGWYCGFFRWFNRMFDKARHRYESIVGNSFGK
PLRYLIFYGCLVGAMAFFFLRLPTAFLPDEDQGFIVCQIQLPAGATQERTIKMLEKVEKH
FLENEKKSVDSLITVAGFSFAGRGQNMGLAFVKLKDWKLRPTPDLKAPAVAGRAMGAFSK
FRDGMAFAFSPPAVVELGQANGFDFQLQDRGGLGHQALMDARNQLLGMASQNKKLMAVRP
NGQDDTPQFKLNIDDVRAGALGVSLADINNTLATAWGSSYVNDFLQNGRVKKVYLQADAT
YRMVPEDINKWYVRNDKGEMVPFSAFATAKWEHASPRLERYNGIPSSEIMGNAAKGISTG
EAMAEMEAMAAKLPPGISYEWTGLSFEEKNAGKQAPALYAISLLVVFLAVAALYESWSIP
FVNLLMLPLGLVGAVTAVTLRVLPNDIYLQIGLLTTIGLSTKNAILIIQFIKDQMHQGHE
LVEATLTAVKIRLRPVIMTSLAFFFGTLPLALTKGAGAGAQNAIGTAVTGGLLSATFIDL
IFIPFFFVMVTKMFSKKHGTAKKAAAAPVSEVH
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggtttttcataaacagacccatcttcgcctgggtcatcgccatcggggtcatg
ctggcaggccttctggccatgaagtcgctgccggtctcccagtacccgcccatcgcgccg
ccgcagatctcggtcaacgccatgtacccgggcgcctccgcccagacggtgcaggacacg
gtcacccaggtgatcgagcagaagatgaacggcatcgacaacctgctctacatgtcctcc
acgagcgactccgccggggcggtttccatcaacctgaccttcagggccgggaccgacccg
aacatcgcccaggtgcaggtgcagaacaagctgcagctcgccacgccgcttttgccgcag
gtggtgcagaagcagggcatccaggtggtgaagtcgacccgtaacttcctgatgatcgtc
ggcatcgtctccgaggacggcagcctaaaccgctaccagttgaccgactacatggtgtcc
aacgtacaggacatcgtgagccgcatcgagggcgtgggcgaggtgaccgtgttcggttcc
cagaacgcgatgcgcatctggctgaaccccgacaagctgaacaactacaagctgaccccc
aacgacgtctccaacgcgctgcaggcccagaacgcgcaggtctccgccggccagttcggc
ggcatgcccgcgatgcaggggcagcagctgaacgcgaccatcaccgcccgcaccctgctg
cagaaccaggagcagttcgaggagatcgtgctgcgcaccaactccgacggctccacggtg
aagctcagggatgtggccaagatcgacgtcggcaccgagaactacgacaccctggcccgc
tacaagggtaagccggtcgccgccatggcgctgcgccttgccgccggcgccaacgcgctc
gacaccgcggaccgggtcaagaccaagatggtcgagctggagaagttcttcccggccggc
gccaaggtcgtctacccgtacgacaccaccccgttcgtcaagatctccatggaggaggtg
gtgaagaccctgatggaggcggtctgcctcgtcttcatcatcatgttcctgttcctgcag
aacatccgcgcgacgctgatcccgaccatcgcggtgccggtcgttctccttggcaccctg
ggcgtcctcttcgcagccggtttctccatcaacaccctgaccatgttcgccctggtcatc
gtcatcggcctcctggtcgacgacgccatcgtcgtcgtcgagaacgtggaaaggatcatg
accgaggaggggctctctcctcacgacgccacggtgaagtcgatggggcagatcacctcg
gccctctgggggatcgcgacggtgctctccgccgtcttcatcccgatggccttcttcggc
ggttccaccggcgtcatctaccgccagttctccatcaccatcgtctccgccatgatcctg
tcggtgctgaccgcccagatcctcaccccggcgctctgcgcgacgcttcttaagccggtc
gtcaaggggcacgagccctgcgagtccgggtggtactgcggcttcttccgctggttcaac
cggatgttcgataaggcgcgccacaggtacgagtcgatcgtcggcaactccttcggcaag
ccgctgcgctacctgatcttctacggctgcctggtcggcgccatggccttcttcttcctc
aggctccccaccgcgttcctgccggacgaggaccagggcttcatcgtctgccagatccag
cttcctgcgggcgccacccaggagcgcaccatcaagatgctcgagaaggtcgaaaagcac
ttccttgaaaacgagaagaagagcgtcgactccctgatcacggtggccggtttcagcttc
gccggtcgcggccagaacatgggtctcgccttcgttaagctcaaggactggaaactgcgt
cccaccccggacctgaaggcaccggccgtcgccggccgtgccatgggcgccttctccaag
ttccgcgacggcatggccttcgccttttcgccccccgcggtggtcgaacttggccaggcc
aacggcttcgacttccagctgcaggaccgcggcggcctcgggcaccaggcgctcatggat
gccaggaaccagctcctgggcatggccagccagaacaagaagctcatggcggtgcgcccc
aacggccaggacgacaccccgcagttcaagctgaacatcgacgacgtgcgcgcgggtgcc
ttgggcgtgtcgctggcggacatcaacaacaccctggccacggcctggggctcctcctac
gtcaacgacttcctgcaaaacggcagggtcaagaaggtgtacctgcaggccgacgcgacc
tatcgcatggtccccgaggacatcaacaagtggtacgtgagaaacgacaagggggagatg
gtacccttctccgccttcgccaccgccaagtgggagcacgcctcgccgcgccttgagcgc
tacaacggcatcccgagctccgagatcatgggcaacgccgccaaggggatctcgaccggc
gaggcgatggccgagatggaggccatggccgccaagctccctccggggatcagctacgag
tggaccggcctttccttcgaggagaagaacgcgggcaagcaggcgcctgccctctacgcc
atctcgctcctggtggtctttctcgccgtcgcggccctctacgaaagctggagcatcccg
ttcgtcaacctgctcatgctcccgctgggccttgtcggcgcggtcaccgcggtgaccctg
cgggtgctcccgaacgacatctacctgcagatcggtctcctgaccaccattggtctgtcg
accaagaacgcgatcctgatcatccagttcatcaaggaccagatgcaccaggggcacgaa
cttgtcgaggcgacgctcaccgccgtcaagatcaggctccgcccggtcatcatgacctcg
ctcgccttcttcttcggcacgctgccgctggctctcaccaagggggcgggtgccggcgcc
cagaacgccatcggcaccgcggtgaccggcggtctgttatcggcgaccttcatcgacctt
atcttcatcccgttcttcttcgtcatggtgacgaagatgttctcaaagaagcacggaacg
gccaaaaaggccgctgccgcccccgtttcggaggtgcactag
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