Gordonia sp. YC-JH1: CXX93_04465
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Entry
CXX93_04465 CDS
T05256
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CXX93_04465 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goc03400
]
CXX93_04465 (nth)
Enzymes [BR:
goc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CXX93_04465 (nth)
DNA repair and recombination proteins [BR:
goc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CXX93_04465 (nth)
Prokaryotic type
CXX93_04465 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AUH67731
LinkDB
All DBs
Position
962481..963236
Genome browser
AA seq
251 aa
AA seq
DB search
MSRRKEETRLGLVRRARRMNRALEAAFPHVYCELDFTTPLELSVATILSAQCTDVRVNQV
TPALFARYPDARAYAEADRTELEEMIRSTGFYRNKANSIIGLGQALVSRFGGEVPANLKD
LVSLPGFGRKTANVVLGNAFGVPGITVDTHFGRLVRRWDWTRETDPVKVEHAVGALFEKR
DWTDLSHRIIFHGRRVCHARKPACGVCVLAKDCPSYGEGPTDKGAAAALVKGPETEHLLA
LAGVEQSGAAQ
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagacgcaaggaggagaccaggctgggcctggtccggcgggcgcggcggatgaac
cgagcgctggaggcggccttcccgcacgtctactgcgaactggatttcacaacgccgctg
gaactgtcggtcgcgacgatcctgtcggcacagtgcaccgacgtgcgcgtgaaccaggtg
acgcccgcgctcttcgccaggtacccggacgcgcgcgcatatgccgaggccgaccggacc
gagttggaggagatgattcggtccaccggcttctatcggaacaaggccaattcgatcatc
ggcctggggcaggcgctggtctcgcggttcggtggcgaggtgccggcgaatctcaaggat
ctggtgagccttcccggcttcgggcgcaagacggccaacgtcgtcctgggcaacgccttc
ggcgtgcctgggatcaccgtcgacacgcatttcggccggctggtccgccgctgggactgg
actcgggagaccgacccggtgaaggtggagcacgcggtgggcgcgctgttcgagaagcgc
gactggaccgacctgtcgcatcgcatcatcttccacggtcggcgcgtctgccatgcgcgc
aaaccggcgtgcggtgtctgcgtgctcgccaaggactgtccctcctacggtgaggggccc
actgacaagggcgcggcggcggcactggtgaaggggccggagaccgagcatctgctcgcc
ttggccggagtcgagcagtcgggagcggctcagtga
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