Gordonia sp. YC-JH1: CXX93_11780
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Entry
CXX93_11780 CDS
T05256
Name
(GenBank) hypothetical protein
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00550
Peptidoglycan biosynthesis
goc01100
Metabolic pathways
goc01502
Vancomycin resistance
goc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CXX93_11780
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CXX93_11780
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CXX93_11780
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
goc01002
]
CXX93_11780
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
goc01011
]
CXX93_11780
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
goc01504
]
CXX93_11780
Enzymes [BR:
goc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
CXX93_11780
Peptidases and inhibitors [BR:
goc01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
CXX93_11780
Peptidoglycan biosynthesis and degradation proteins [BR:
goc01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
CXX93_11780
Antimicrobial resistance genes [BR:
goc01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
CXX93_11780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Motif
Other DBs
NCBI-ProteinID:
AUH70301
LinkDB
All DBs
Position
2526004..2526882
Genome browser
AA seq
292 aa
AA seq
DB search
MNLTRSYTGTPIENSAPYGALATSCGVRAEAAAGAAHASAGWTAAAAPTARTAVTAATRR
RPLTGRRVKERRSRAWRGEPVIGQPSQLPGSRASTPIRTLIGVSAGPSEVDVSHADRVRS
RFDPVIRVRVTAAAAALAIAASAAVAPAAHADPATARANFLGVSLAPGTAGLTPQLAIAY
TLAHREARASGVALSVTSGKRSRAEQAALWRQGIADYGSPAAARRWVLPPDESTHVTGEA
VDVGPRSGARWLQANGIRWGLCRVYDNEWWHFELAALPGTACPPRLPDAASR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcacgcgctcgtacaccgggacacccatcgagaacagcgcgccgtacggagca
ctggcgacgtcgtgcggtgtgagggccgaggcggcggcgggcgccgcccacgcctcggcc
ggatggacggctgccgccgcgccgaccgccaggacggcggtgaccgcggcgacacggcgg
cgtccgctgacggggcgacgagtgaaggaacgacgatcacgggcctggcgcggcgaacct
gtcatcggtcaaccgtcgcagctgccgggttcgagggcaagtaccccgatacgcacgctg
atcggcgtgtcggccggtccgtcggaggtcgacgtctcgcatgccgaccgggtccgtagt
aggttcgaccccgtgatccgagtgcgagtgaccgctgctgcggcggccctggcgatcgcc
gcatccgcggcggtcgcgccggccgcccatgccgatccggcgacggcccgggcgaacttc
ctcggcgtgtcgttggcccccggcaccgccggactcacgccgcagttggcgatcgcctac
acgctcgcgcaccgtgaggcgcgtgcctccggggtggcgctgtcggtaacgtccggaaag
cgctcgcgcgcggagcaggcggcactgtggcggcagggcatcgccgactacggcagtccc
gccgccgcgcgccgctgggtactgccgcccgatgagtcgacccacgtcacgggcgaggcc
gtcgatgtgggaccgcggtcgggcgcgcgttggctgcaggccaacggcatccgctggggc
ctgtgccgggtgtacgacaacgagtggtggcacttcgaactggcggcgctgcccggaacg
gcgtgcccgcccaggctccccgacgcagcgagccgctga
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