Gordonia sp. YC-JH1: CXX93_15560
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Entry
CXX93_15560 CDS
T05256
Symbol
kgd
Name
(GenBank) multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
goc
Gordonia sp. YC-JH1
Pathway
goc00020
Citrate cycle (TCA cycle)
goc00630
Glyoxylate and dicarboxylate metabolism
goc00785
Lipoic acid metabolism
goc01100
Metabolic pathways
goc01110
Biosynthesis of secondary metabolites
goc01120
Microbial metabolism in diverse environments
goc01200
Carbon metabolism
goc01210
2-Oxocarboxylic acid metabolism
Module
goc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
goc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
goc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CXX93_15560 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
CXX93_15560 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CXX93_15560 (kgd)
Enzymes [BR:
goc01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
CXX93_15560 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
CXX93_15560 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
CXX93_15560 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
CXX93_15560 (kgd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
DUF5029
Motif
Other DBs
NCBI-ProteinID:
AUH69486
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All DBs
Position
3347551..3351249
Genome browser
AA seq
1232 aa
AA seq
DB search
MSSSISESDFGQNEWLVEEMYQRFQTNPESVDPSWHELLKNYRPGSTATAPSSNGAAQAT
RVAPKQAVTLDTEPTKAAPAPTRAPAPARESAATKAASGTSLAASAAKPAADAGTDTNKV
LRGPAATIVRNMSASLEVPTATSVRAVPAKLMIDNRVVINNHLARTRGGKVSFTHILGYA
IVQAIKAFPNMNRHFAVVDGKPNVVTPAHTNLGLAIDLPGKNGNRTLVVAAIKGCETKNF
SEFVAAYEDIVRRARDGKLGAEDFAGVTISLTNPGTIGTVHSVPRLMQGQGAIIGAGAME
YPAEFQGASDEQIAEMGVGKLMTLTSTYDHRIIQGAESGDFLRKVHTLLLDDSFWDELFT
SLQIPYEPVRWRRDVPAGLVDKNTRVLELIAAYRSRGHLMADTDPLMMNAAAKASHPDLD
VLTYGLTLWDLDRTFNVGGFHGQRNMKLRDVLSILRDAYCRHVGVEYTHILDPEQQRWLQ
ERVEIKHAKPSVAEQKYILSKLNAAEAFETFLATKYVGQKRFSLEGAEAVIPMMDAVLDQ
SAEHQLEEVVIGMPHRGRLNVLANIVGKPYSKIFTEFEGNLGPADAHGSGDVKYHLGAEG
KYYQMFGDNEITVSLTANPSHLEAVDPVLEGIVRAKQDGMSEDREFDVLPLMLHGDAAFA
GQGIVAEVLNMSMLNGYRTGGTVHIVVNNQVGFTTAPEHSRSTQYCTDIAKMIGAPVFHV
NGDDPEACVWAAKLAVDYREAFHRDVVIDLVCYRRLGHNEGDDPSMTQPAMYDVINNIRS
VRKSYTEALIGRGDISTKEAEDALRDYQGQLERVFVEVKELERFTPEASPSVEGEQTLLT
KLVTAVPQEKLAEIGDAFGNLPEGFNAHPRVKPVIKRRHEMPVKGDIDWSFAEILAFGTL
VQEGRTVRLSGQDSRRGTFTQRHSVLIDRENGSEYTPLNHLPDATGRFLVYDSPLSEYGV
LGFEYGYALADPDALVLWEAQFGDFVNGAQSIIDEFISSGEAKWGQRSDVVLLLPHGHEG
QGPDHTSGRIERFLQLCAEGSMTVALPSTPASYFHLLRRHVHDGISRPLVVFTPKSMLRN
KAAVSPVEDFTEGKFLSVIDDPRFAKQGGDRDKVQRVQLVSGKLYYELAARQAKDGRDDV
AIIRVEQLYPVPYRRLARTLEQYPNAKDFVWVQEEPANQGPWPFLGLWLPEMLPELLGGL
RRISRRPMSAPSSGSSKVHAVEQQEIIDQAFR
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagttcgatttccgaatccgacttcggacaaaacgaatggctggtcgaggagatg
taccagcgattccagaccaaccccgaatcagtcgatccgagctggcacgagcttctcaag
aactatcgcccgggttcgacggcgaccgccccgtcctcgaacggtgcggcccaggcgacc
cgggtggctccgaagcaggcggtcacgctcgacaccgaaccgaccaaggccgcaccggcg
cccacccgcgcccccgcaccggcacgtgagtcggccgcgaccaaggccgcatccggcacc
agcctggcggcgtccgccgccaagcctgccgccgatgccgggacagacacgaataaggtg
ctccgcggccccgccgcgaccatcgtgcgcaacatgtcggcctcgctcgaggtcccgacc
gcgaccagcgtccgcgcggttcccgcgaagctgatgatcgacaaccgcgtcgtgatcaac
aaccacctcgcccgcacccgcggcggcaaggtgagcttcacgcacatcctcggctatgcg
atcgtccaggcgatcaaggcgttcccgaacatgaaccgccacttcgccgtcgtggacggt
aagccgaacgtcgtcacgcccgcccataccaatctcggcctcgcgatcgacctgccggga
aagaacgggaaccgcacgctggtcgtcgccgcgatcaagggctgcgagaccaagaacttc
tccgagttcgtcgcggcgtacgaggacatcgtccgccgggcccgcgacggcaagctcggc
gccgaggacttcgccggcgtcacaatctcgctgaccaaccccggcaccatcggcaccgtc
cactcggtgccgcggctgatgcagggccagggcgccatcatcggcgccggagccatggag
tacccggccgagttccagggcgcgagcgatgagcagatcgccgagatgggtgtcggcaag
ctgatgacgctgacgtccacctacgaccaccggatcattcagggcgccgaatcgggcgac
ttcctccgcaaggtccacacgctgctgctcgacgactccttctgggacgagctgttcacc
tcgctgcagatcccgtacgagcccgtccgctggcgtcgcgacgtccccgccggactcgtc
gacaagaacacgcgcgtcctcgagctcatcgccgcgtaccgcagccgcggtcatctgatg
gccgacaccgacccgctgatgatgaacgcggccgccaaggcctcgcatccggacctcgat
gtactgacctacggcctgactctctgggatctggaccgcaccttcaacgtcggcggcttc
cacggacagcggaacatgaagctgcgcgacgtgctgtcgatcctgcgcgacgcctactgc
cgccacgtcggcgtcgagtacacgcacatcctcgacccggagcagcagcgctggctccag
gagcgggtggagatcaagcacgccaagccgtcggtcgccgagcagaagtacatcctgagc
aagctgaacgccgccgaggcgttcgagaccttcctcgcgaccaagtacgtcggccagaag
cgcttctcgctcgagggcgccgaagccgtcatcccgatgatggacgcggttctcgatcag
agcgccgaacaccagctcgaagaggtcgtcatcggcatgccgcaccgcggccggctgaac
gtcctggccaacatcgtcggcaagccgtactcgaagatcttcaccgagttcgagggcaat
ctcggccccgctgacgcgcacggctccggcgacgtgaagtaccacctcggcgccgagggc
aagtactaccagatgttcggcgacaacgagatcaccgtctcgctcaccgccaaccccagc
catctggaggccgtcgacccggtcctcgagggcatcgtccgcgccaagcaggacggcatg
tcggaggaccgcgagttcgacgtgctgccgctgatgctgcacggtgacgccgccttcgcc
ggtcagggcatcgtcgccgaggtgctgaacatgtcgatgctgaacggctaccgcaccggc
ggcaccgtccacatcgtggtgaacaaccaggtcggtttcaccaccgcacccgagcactcg
cgctccacgcagtactgcaccgacatcgcgaagatgatcggcgcaccggtcttccacgtg
aacggcgacgatccggaggcctgcgtctgggccgccaagctcgccgtcgactaccgcgag
gcgttccaccgcgacgtcgtgatcgacctcgtctgctaccgccgcctgggccacaacgag
ggcgacgatccgtcgatgacccagccggcgatgtacgacgtcatcaacaacatccgcagc
gtccgcaagagctacaccgaagcgctgatcggccgtggtgacatctccaccaaggaggcc
gaggacgcactgcgcgattaccagggacaactcgagcgcgtcttcgtcgaagtcaaggaa
ctcgaacggttcacacccgaggcgtcgccgtcggtggagggcgagcagacgctgctcacc
aagctggtgaccgcggtgccgcaggagaagctcgcggagatcggcgacgccttcggcaat
ctgcccgagggattcaacgcccatccgcgcgtcaagccggtcatcaagcggcgccacgag
atgccggtcaagggcgacatcgactggtcgttcgccgagatcctcgccttcggcaccctg
gttcaggaaggccgcacggtgcggctgtccggtcaggactcccgccgcggaacgttcact
cagcgccactcggtgctgatcgaccgcgagaacggctcggagtacacaccgctgaaccac
ctgcccgacgcgaccggccgcttcctggtgtacgactcgccgctgagcgagtacggcgtg
ctcggcttcgagtacggctacgccctcgccgaccccgacgcactcgtcctgtgggaggcg
cagttcggcgacttcgtcaacggtgcgcagtcgatcatcgacgagttcatcagctccggc
gaggccaagtggggtcagcgcagcgacgtcgtgctgctgctgccgcacggccacgagggc
cagggtcccgaccacacctcgggccgcatcgagcgcttcctgcagttgtgcgccgagggt
tcgatgaccgtcgcgctgccctcgactccggcgagttacttccacctgctgcggcgccac
gtgcacgatggcatcagccggccgctggtggtcttcaccccgaagtcgatgctgcgcaac
aaggcggccgtctcgccggtggaggatttcaccgagggcaagttcctctccgtgatcgac
gatccgcgtttcgccaagcagggcggcgaccgcgacaaggtgcagcgtgtgcagctggtc
agcggcaagctctactacgagctggccgcacggcaggcgaaggacggtcgcgacgacgtc
gcgatcatccgcgtcgagcagctgtacccggtgccctaccgcaggctcgcgcgcacgctg
gagcagtacccgaacgcgaaggacttcgtctgggttcaggaggagccggcgaaccagggt
ccgtggccgttcctcggtctctggctgccggagatgctccccgagttgctcggcggcctc
cgccggatctcgcgccggccgatgtccgcgccgtcgtcgggctccagcaaggtccacgcg
gtggagcagcaggagatcatcgatcaggccttccgctga
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