Galendromus occidentalis (western predatory mite): 100905076
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Entry
100905076 CDS
T11057
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
goe Galendromus occidentalis (western predatory mite)
Pathway
goe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
goe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100905076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
goe03400
]
100905076
Enzymes [BR:
goe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100905076
DNA repair and recombination proteins [BR:
goe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
100905076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
BRCT
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
100905076
NCBI-ProteinID:
XP_028969005
UniProt:
A0AAJ7SJ51
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MFIECIFPSLPVSFFPIIRLLLPNLDNVRGAYHMKETMIGREYIRLTGLSQETRKAQEIL
NFKRSDPSGKRFGFRKGFETLVFEILKNRSNMKSSELSIQKINDILNEMTKSKDAAQTQL
KFLFSHCDPLEHKWLIRIILRHSLNIRKSTSVVLGALHPMAEEMYSVNRNLEDICMTLYD
AELVVSRPKIGLGKPFGFMLSARSNLASLESDMGHSEFLMEIKFDGERVQCHKNQNEFSY
YSRGYNEYSATYGTSGQHDNSLSSYLSRAIDPHVVTCIFDGEMMSYDGISKKFVPKGRSR
DLKKIKTDDVSHQPCYMIFDLLYYNGKVFTDKPLLERRRVLENLLTPIEGRVQLSAARSG
LTKDEALKFMNEATSNLEEGIVIKKADGPYVPNERDAGWLKLKRDYMNEGVADLDVIIVG
AYYAAGKTAIIYDSLLVAVAEDPETSSDPPKYFYSFGRVHSGLSEAFMKDLLGKTGDAWK
PFNRDKCPTWLKMSSMANCPNVIIEPKSSVILTVKAAELVPTKSFMTECSMRFPRVSALR
FDKPWKDCMRYSELAKLYRETKGTMTAGDLKIDLETKKEQVRSGRGRSPQRKIKVQLERK
LTPVKRVKSDFLLGKEFCIFAEKSVRSALEKAVRRHGGTCVLLPRPSTFMVVADRLSFRI
KTILETRDVAKVSSWGLKRKMT
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgttcattgaatgtattttcccgagtctgcctgtttcatttttcccaatcatacggctc
ctacttccgaatctggacaatgtccgaggagcttaccacatgaaagagaccatgataggc
agagaatacatccgactgactggtctcagccaagaaaccaggaaggctcaagagatcttg
aatttcaagcgttccgatccctcaggcaaacgattcggcttccgcaaaggtttcgaaacg
ctcgtcttcgaaattctgaagaacagatccaacatgaagagcagtgagctctctatacag
aaaatcaatgacatactcaacgaaatgacgaagagcaaggacgcagctcaaacacaactg
aagttcctgtttagtcattgcgatcctttggaacacaaatggctcataaggataatcctt
cgacattcattgaatatcaggaagagcacgtctgtggttctcggcgcactccatccgatg
gcagaagagatgtattcagtcaaccggaacttagaggacatctgcatgactctgtacgac
gcggagctggtcgtaagcagaccgaaaatcggtctcgggaagcctttcggcttcatgctg
tcagctcgctcgaacctcgcaagcttagagtccgacatgggtcactccgaattcttgatg
gaaatcaagttcgacggagaacgagtccaatgccacaagaatcaaaacgagttcagctat
tattcccgaggctacaacgaatacagtgccacatatggaacctcgggccaacacgacaac
agtttgagtagctatttgagccgcgcgatagatcctcatgtcgtaacgtgtatcttcgac
ggagaaatgatgtcgtacgacggtatcagcaagaaattcgttccgaaaggccgaagtcgc
gatctcaagaagatcaagaccgacgacgtgtcacaccagccttgttacatgatattcgat
ctgctttactacaacgggaaggttttcacggataagcctctgctggaacgccggcgggta
ctcgaaaatttattgacgccaatcgaaggacgggttcaactgtccgctgcgcgttccgga
ctaacgaaggacgaagctttgaaatttatgaacgaagcaacctcgaatcttgaggaagga
atcgttatcaaaaaagctgatgggccatatgttcccaacgagcgcgatgcgggatggctg
aagcttaagcgagactatatgaacgaaggggttgcagatctcgacgtgatcatagtcggg
gcatactacgccgctggaaaaaccgcaattatttacgacagtctcctcgtggccgtcgct
gaggatccggagacgtcatcagatcctccgaaatatttttacagcttcggtcgagttcat
tcgggtctttccgaagctttcatgaaggaccttttggggaagaccggtgacgcttggaaa
ccattcaaccgggataagtgtcccacttggctaaaaatgtcctccatggctaactgtccc
aatgtgatcattgagccgaaaagctcggtgattctgacggtcaaagcggcggagctagtt
ccaacgaaatctttcatgaccgaatgcagcatgcggtttccgagagtgtcagccctcaga
tttgacaaaccatggaaggactgcatgaggtactcggagcttgcgaaactatacagggaa
accaagggaactatgactgcgggtgatttgaagatcgacctggagacgaaaaaggagcaa
gtgaggtctgggagaggcaggagtccgcagcggaaaatcaaagtgcaattggaaaggaag
ctcacgccagtgaagcgagtgaagagcgactttcttctcgggaaagaattttgcatattc
gcggagaaatctgtccgcagtgctctggagaaggctgtcaggagacacggcggaacctgt
gtgcttctccccagaccttcaacgttcatggttgttgctgataggctttcattccggatc
aagaccatactcgaaacacgggacgttgcgaaggtgagttcttgggggttgaagcggaag
atgacgtga
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