KEGG   Gordonia sp. KTR9: KTR9_0417
Entry
KTR9_0417         CDS       T02216                                 
Name
(GenBank) putative EndoIII-related endonuclease
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
gor  Gordonia sp. KTR9
Pathway
gor03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    KTR9_0417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gor03400]
    KTR9_0417
Enzymes [BR:gor01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     KTR9_0417
DNA repair and recombination proteins [BR:gor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     KTR9_0417
 Prokaryotic type
     KTR9_0417
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S
Other DBs
NCBI-ProteinID: AFR47083
UniProt: J9S9M1
LinkDB
Position
482758..483534
AA seq 258 aa
MSARKTATAGPAVARKQETHLGLVRRARRMNRTLKVAFPHVYCELDFTDPLELSVATILS
AQCTDVRVNLTTPALFARYRTAADYAGADRTELEEMIRPTGFYRNKANSIIGLGQALVER
FDGEVPNNLKDLVSLPGFGRKTANVVLGNAFGVPGITVDTHFGRLVRRWQWTEETDPVKV
EHAIGELIERREWTDLSHRVIFHGRRVCHARKPACGVCVLAKDCPSVGTGPMDKAEAAAL
VKGPETEHLLALAGVVAP
NT seq 777 nt   +upstreamnt  +downstreamnt
gtgagcgcacgcaagactgcgaccgcgggaccggccgtggcacgcaagcaggagacccat
ctcggattggtccggcgtgcgcggcggatgaatcgcaccctcaaggtcgccttcccgcac
gtgtactgcgaactcgacttcaccgatccgctcgagctctcggtcgcgacgatcctgtcg
gcccagtgcaccgatgtgcgcgtcaacctgaccaccccggcgctgttcgcccggtaccgg
acggccgcggactacgccggtgccgaccgcaccgaactcgaggagatgatccgcccgacc
ggcttctaccggaacaaggcgaactcgatcatcgggctcggccaggccctcgtcgagagg
ttcgacggggaggtcccgaacaacctcaaggacctggtgtcgttgcccgggttcggacgg
aagaccgcgaacgtggtgctgggcaacgccttcggtgttcccggcatcaccgtcgacacc
cacttcggccgcctggtacgacgctggcagtggaccgaggagaccgatccggtgaaggtc
gagcacgccatcggcgagctgatcgagcgacgcgagtggacggacctgtcgcaccgggtg
atcttccacggccgccgcgtgtgccacgcacgcaagccggcctgcggtgtgtgcgtcctc
gccaaggactgcccgtcggtggggaccggcccgatggacaaggccgaggccgccgccctg
gtgaagggcccggagaccgagcatcttctcgcgttggcaggggtcgtcgcgccgtga

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