KEGG   Gordonibacter pamelaeae: GPA_23640
Entry
GPA_23640         CDS       T02609                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase/endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
gpa  Gordonibacter pamelaeae
Pathway
gpa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gpa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GPA_23640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gpa03400]
    GPA_23640
Enzymes [BR:gpa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GPA_23640
DNA repair and recombination proteins [BR:gpa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GPA_23640
 Prokaryotic type
     GPA_23640
SSDB
Motif
Pfam: HhH-GPD HHH HHH_5 EndIII_4Fe-2S RecR_HhH HHH_8 ZYG-11_interact IMS_HHH
Other DBs
NCBI-ProteinID: CBL04559
UniProt: D6EA12
LinkDB
Position
complement(2355853..2356515)
AA seq 220 aa
MPRETMTAKRERTLEVARRMNEHYPAAECALHYWGDPFRLTIAVLLSAQTTDKGVNKVTP
KLWERYPTPADLASADVRDVEDIIRTIGFFHTKAANVIKCAQMVVTDYGGEIPRDIDELQ
KLPGVGRKTANVVLNEAFGIVEGIAVDTHVFRIAHRLKFAGPSADTPAKTETALLKLYPR
EYWGPINHQWVLFGRETCIARSPKCGECFICDLCPSCGKV
NT seq 663 nt   +upstreamnt  +downstreamnt
atgccgcgcgagaccatgaccgccaagcgggagcgcacgctcgaggtggcgcgccgcatg
aacgagcactacccggccgccgagtgcgcgctgcactactggggcgacccgttccgcctg
accatcgccgtgctgctgtccgcgcagaccaccgacaagggcgtgaacaaggtcacgccc
aagctgtgggagcgctaccccacgccggccgacctcgcctccgccgacgtgcgcgacgtg
gaggacatcatccgcaccatcggctttttccacacgaaggcggcgaacgtcatcaagtgc
gcccagatggtggtgaccgactacggcggcgagatcccgcgcgacatcgacgagctgcag
aagctgccgggcgtgggccgcaagacggcgaacgtggtgctcaacgaggcgttcggcatc
gtggagggcatcgcggtggacacgcacgtgttccgcatcgcgcaccggctgaagttcgcg
ggcccatccgccgacacgccggcgaaaaccgagacggcgctgctcaagctctacccgcgg
gaatactgggggcccatcaaccaccagtgggtgctgttcggccgcgagacgtgcatcgcg
cgcagcccgaagtgcggcgagtgcttcatctgcgacctgtgccccagctgcggcaaggtg
tag

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