Gamma proteobacterium HdN1: HDN1F_08010
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Entry
HDN1F_08010 CDS
T01300
Symbol
patB
Name
(GenBank) Aminotransferases class-I
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb00270
Cysteine and methionine metabolism
gpb00450
Selenocompound metabolism
gpb01100
Metabolic pathways
gpb01110
Biosynthesis of secondary metabolites
gpb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HDN1F_08010 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HDN1F_08010 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gpb01007
]
HDN1F_08010 (patB)
Enzymes [BR:
gpb01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
HDN1F_08010 (patB)
Amino acid related enzymes [BR:
gpb01007
]
Aminotransferase (transaminase)
Class II
HDN1F_08010 (patB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DUF6887
Motif
Other DBs
NCBI-ProteinID:
CBL44384
UniProt:
E1VHU2
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All DBs
Position
986581..987759
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AA seq
392 aa
AA seq
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MMPKFAEISFDTVIDRNHTDCEKFDQREQRFGRADVMPLWVADMDFAAPACVRKALAQRL
EHPVFGYTFPADTLYEQLCGWFARRHQWALDPAQVMLAPGVVPSLFACVQALTQPGEGVL
VPTPVYPPFLGAVQQTGRELIQSPLRETERGYTLDFEHLEREAANARMLLLCSPHNPVGR
VWRADELKALIDLALRHRLVVVSDDIHCDLTYLGEKHLPLATLAPPELRLITALSPSKTF
NIPALNLSALVVAHRGDSNAIQKYFQRQRVNPYNPFALVAFEAAYREGDAWLEALRAYLG
ANRQLVAEFQQVHPILRCHLPQASCLIWLDCRALSLSDPDLSAFFIEKARLGLNEGISFG
MGGEGFMRLNIGTQKRVLELALAQLAASLKEF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
gtgatgcctaaatttgcggaaatcagctttgatactgtgatcgaccgcaatcacacggac
tgcgaaaagttcgatcaacgtgaacaacggtttgggcgcgccgatgtaatgcctttgtgg
gtggccgatatggattttgcggcacccgcctgtgtacgcaaggctcttgcgcagcgcctt
gagcatccagtatttgggtatacgttcccggcggatacgctgtacgagcagctttgcggt
tggtttgcgcgccgtcatcaatgggcgttagaccctgcacaagtcatgctcgctcctggg
gttgtgccttcgctatttgcctgcgttcaagcgcttacccagccgggggagggcgtactt
gtgcctacgccggtgtacccgccttttttgggcgcagtgcagcaaactgggcgagagttg
attcaaagcccgctgcgggagacggaacgcggctatacgctggattttgagcatttggag
cgtgaagcggcaaatgcacggatgctgctgttgtgcagccctcacaatccagtggggcgg
gtctggcgtgcagatgaacttaaggcgctgattgatcttgcgttgcgccatcgtttggtg
gtggtaagcgacgatattcactgtgacctgacctatctgggagagaagcatcttccgcta
gcaacgctggcgccgccagaattgcgcctgattactgcgctatcgccgagtaaaaccttt
aatattccggcgcttaatctgtctgccttggtcgttgcgcatcgtggggattccaatgcg
atacaaaagtattttcagcgccagcgtgtaaacccgtacaatccgtttgcgcttgtggcc
tttgaagcggcttatcgtgagggggatgcgtggctggaggctttacgtgcctatcttggt
gcgaaccggcagttggttgcggagtttcagcaggtgcacccgattttgcgttgccatttg
ccgcaggcgagctgcctgatttggctggattgccgcgcgctttcgctttccgacccagac
ttaagtgccttttttatagaaaaagcacgcctcggtttgaacgaaggtattagcttcggt
atgggcggcgaaggctttatgcgcctgaatattggcactcaaaaacgtgttttagagctc
gctttggcgcagctggcggcaagcttaaaagagttttag
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