Gamma proteobacterium HdN1: HDN1F_09600
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Entry
HDN1F_09600 CDS
T01300
Name
(GenBank) HlyD family secretion protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb01501
beta-Lactam resistance
gpb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HDN1F_09600
01503 Cationic antimicrobial peptide (CAMP) resistance
HDN1F_09600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gpb03036
]
HDN1F_09600
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpb02000
]
HDN1F_09600
01504 Antimicrobial resistance genes [BR:
gpb01504
]
HDN1F_09600
Chromosome and associated proteins [BR:
gpb03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HDN1F_09600
Transporters [BR:
gpb02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HDN1F_09600
Antimicrobial resistance genes [BR:
gpb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HDN1F_09600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
BSH_CusB
Beta-barrel_RND_2
Biotin_lipoyl
HH_EMRA
HH_CzcB
YknX_C
BSH_CzcB
RND-MFP_C
HH_AprE
HH_YBHG
CCDC39
Motif
Other DBs
NCBI-ProteinID:
CBL44543
LinkDB
All DBs
Position
1181577..1182833
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AA seq
418 aa
AA seq
DB search
MIADRAVPHGNTINGTVSACGGKMKNKSKPKTSYAVRWLFALVVATVLGASLPIAALAKA
GTPDGGNDASATLTAAHNKAAVVAKNGVIPIDAKSPLERGKSQAIATVEYRSLDATFGSE
AVIEAERQSTVSAQVAGRVLEINYRPGDQVPANAVIMRIDPRMAEQEVEGMDARINEARV
NLDNTRRQYQRVNNLFKEKYVSQADYDRADAAFKAAQAQLKTLLASRGQAETSAEYATIS
APYGGVMSELHVEVGEMAVPGKPLATGFDPNDLRATSRVPQAFIDQVRASHKAWVETAPG
KPWLEARRIVILPAADPRTHDTEVRVYLPQNSGDWMPGQFVQVHFVTGVERKLVVPQAAI
LQRSELTAVYVLNQKDEPRLRQIRVGEIQPDGLREVLAGIRAGERISLNPVAATEYAH
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagatcgggccgtaccacacggaaataccatcaacggcacagtaagtgcttgt
ggagggaaaatgaaaaataaatcgaaaccaaaaacgagctacgcagtacgttggttattc
gctttggtagttgcgactgttttgggcgcaagtttaccgattgctgcgttggcaaaagcg
ggtacacccgatggtggtaatgatgcttcggcgacgcttacagcggcgcataataaggca
gccgttgttgcgaaaaatggtgtgatacccattgacgcaaaatctccgctcgaacgcggc
aagagccaagcaatcgccacggttgagtatcgcagcctagatgcaacgtttggctctgaa
gctgtcattgaggcggagcggcagtccacggtgagtgctcaggtggcgggccgcgtgctt
gaaatcaattatcgccccggcgatcaagtgcctgccaatgccgtcatcatgcggattgat
ccgcgaatggcagagcaagaagtggagggcatggatgcacgcatcaatgaagcacgggta
aatctggataacacacgccgtcaataccaacgggtgaataatctatttaaggagaagtat
gtaagccaagcggattacgatcgagccgatgctgcttttaaggcagcgcaagcgcagcta
aaaaccctgcttgcttcgcgtgggcaggcagaaacttcagcagagtacgccaccattagt
gcaccttatggtggcgtaatgtctgaattgcacgttgaagtcggtgaaatggctgtgcct
ggaaagccgctcgcaacaggattcgatcccaacgacttgcgcgccactagccgtgtaccg
caggcgtttattgatcaggtgcgcgcaagccataaagcatgggtagaaacggcccccggg
aagccgtggctggaagcgcgtcgaattgtcatcctgccggctgcagatccacgcacccac
gataccgaagttcgcgtttatttgccgcagaattcgggtgattggatgcctgggcaattt
gttcaggtgcacttcgtgacgggcgtcgaacgaaaattggtggttccgcaagctgcgatt
ttacagcgttcggagctgaccgccgtctatgtgctgaatcagaaagatgagccgaggttg
cgccaaattcgcgtaggcgagattcagccggatggcttgcgggaggttcttgcgggcatc
agggcaggggagcggatttcattgaaccccgttgctgccaccgagtatgcacattaa
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