Gamma proteobacterium HdN1: HDN1F_12010
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Entry
HDN1F_12010 CDS
T01300
Name
(GenBank) Predicted SAM-dependent methyltransferase
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
gpb
Gamma proteobacterium HdN1
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gpb03009
]
HDN1F_12010
Enzymes [BR:
gpb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
HDN1F_12010
Ribosome biogenesis [BR:
gpb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HDN1F_12010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmM_FDX
RLMM_N
FtsJ
Motif
Other DBs
NCBI-ProteinID:
CBL44784
LinkDB
All DBs
Position
1487269..1488345
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AA seq
358 aa
AA seq
DB search
MPSILLYTRPGFERDCAAEAMYHAENAGLSGYVNAKPDSGWLQFCSEDASGVREFVRHFD
FSLWVFARQWFEVRGHVEDLPVGDRVAPLLAALGGATVSDVWVEYPDTNEGKALSKLARG
LEGHLRRSLEKSGQLRSVSPLRAHVLLISGAEAWVGTAPIENSAPWPLGYPRLRMPKAAP
SRSTLKLEEAFHVLLGRRSDALPRPNQRAVDLGAAPGGWTWQLIQRGVKVIAVDNGPLAP
QVMEEGRVLHLREDAFAFKPQQPVDWMVCDVVETPARVAALMERWLVRGWCKTVIFNLKL
PMKRRWQEVQQILEGLEKVLEAAGLRYELRAHQLYHDREEITVWITVDPAIVGRTSAG
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgccttccattttgctttacacccgccccggttttgaacgcgattgcgctgccgaagcc
atgtatcacgctgaaaacgctgggctttcgggctatgtgaacgcaaaacctgatagtggt
tggctgcagttttgttctgaggatgcaagcggtgtgcgtgagtttgtacggcactttgat
ttttctctttgggtgtttgcgcgccagtggtttgaggtacgcggccatgttgaagatttg
ccggtgggggatcgtgtggcgcctctgctcgccgcgcttggcggcgctacggtgagcgac
gtatgggtggaatatccggataccaatgagggcaaggctttgtccaagcttgcccgtggc
cttgaaggccatttgcggcgcagcttggaaaaatctggccagctacgctctgtctcgccc
ctgcgcgcccatgtactgctgatttcgggcgcagaagcttgggtgggtacggcgccgatt
gagaatagtgcgccttggccgcttggctatccgcgtttgcgcatgcccaaagctgcaccc
agccgctctacgcttaagttggaagaggcgtttcatgtgcttttggggcgtcgctctgat
gccttgccgcgccctaaccagcgggcggtagacctaggtgcggcgccgggcggctggacg
tggcagttgatacagcgtggcgtgaaagtgattgcagtcgataacggcccacttgcgccg
caagtaatggaagagggcagagtgttgcatctacgtgaagacgcattcgccttcaagccc
cagcagccggtggactggatggtgtgtgatgtggtggagacgcctgcacgggttgcggcg
ctgatggagcgttggctggtgcgcggttggtgtaagacggtgatttttaacctgaaattg
ccgatgaagcggcgctggcaagaggtgcagcaaattctggaaggcttggagaaggtactg
gaagctgctgggctgcgttatgagttgcgtgctcaccagctttaccacgaccgcgaggaa
attaccgtttggattacggtagaccctgccatcgtaggccgaacgagcgctggctga
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integrated database retrieval system
