Gamma proteobacterium HdN1: HDN1F_32400
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Entry
HDN1F_32400 CDS
T01300
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gpb
Gamma proteobacterium HdN1
Pathway
gpb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HDN1F_32400 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gpb03400
]
HDN1F_32400 (nth)
Enzymes [BR:
gpb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HDN1F_32400 (nth)
DNA repair and recombination proteins [BR:
gpb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HDN1F_32400 (nth)
Prokaryotic type
HDN1F_32400 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CBL46823
UniProt:
E1VPT1
LinkDB
All DBs
Position
complement(3956437..3957093)
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AA seq
218 aa
AA seq
DB search
MNATKRREIFQRFQAANPHPTTELEYNSPFELLIAVILSAQATDVSVNKATRKLFPVANT
PESLFALGVDGLKAYIKTIGLFNSKAENIIKTCAILLEHHNAEVPNSREALEALPGVGRK
TANVVLNTAFGQPTMAVDTHIFRVANRTGIAPGKTVLEVENKLLRYIPKEFLQDAHHWLI
LHGRYTCIARKPHCATCLIEDLCEYKDKYYVPEKNTAK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccaccaaacgccgcgaaatttttcagcgctttcaggccgcaaacccgcatcca
accaccgaattggaatataacagcccgtttgagcttttgatcgcggtgattctctcagca
caagccaccgatgtttcggtgaacaaagcaacacgcaaactgtttccagtcgccaacacc
ccagaatcactgtttgcactgggcgtagacgggctgaaagcctacataaaaaccattggc
ctttttaatagcaaagcagaaaatatcattaaaacctgcgcgattcttcttgagcaccat
aacgcggaagttccgaactcgcgtgaagcgctggaagctttaccgggcgtgggtagaaaa
accgcaaacgtcgtcctgaatacggcctttggccagccaaccatggcggtggacacgcat
atcttccgtgtcgccaaccgcaccggaattgcgccagggaaaaccgtactcgaagtggaa
aacaaactgctccgctacattcctaaggaatttctgcaggatgcacaccactggctgatt
ttgcacggccgctatacctgcatcgcacggaaaccgcactgcgcaacttgcttgatcgaa
gatctatgcgaatataaagacaagtattacgtgccagaaaaaaataccgcgaaataa
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