Geobacter pickeringii: GPICK_02335
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Entry
GPICK_02335 CDS
T03568
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gpi
Geobacter pickeringii
Pathway
gpi00300
Lysine biosynthesis
gpi00550
Peptidoglycan biosynthesis
gpi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gpi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GPICK_02335
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GPICK_02335
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpi01011
]
GPICK_02335
Enzymes [BR:
gpi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GPICK_02335
Peptidoglycan biosynthesis and degradation proteins [BR:
gpi01011
]
Precursor biosynthesis
Amino acid ligase
GPICK_02335
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
AJE02368
UniProt:
A0A0B5B778
LinkDB
All DBs
Position
509731..511248
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AA seq
505 aa
AA seq
DB search
MRLDELAQVIRPTATGGDLAREIEGLCYDSRQVKPGGLFFALRGGATDGHDFIPAARERG
AAAFVLEEPSRAPEGMTWLRVDDARLAMSRAAAAFYGNPTGGVPVIGITGTNGKTTTTYL
VEAILAQAGISSAVLGTISYRFGARVIPAPHTTPESVDLQRTIRELVDLGAAGVVMEVSS
HALEQHRVDGCRFDVGIFTNLTRDHLDYHHDMESYFGSKARLFTELLAADAGKPRRAAVI
NIDDPYGLRLAAVAAAPVISYGLSAGAAVRAEEVSFTVDGVAGSLVTPAGTHPFRSRLLG
RFNLYNILAAAAAGVALDIPLAAIAAAIGGNISVPGRLERVENDRGVTVLVDYAHTGDAL
ENVLETVAEIATGRIITVFGCGGDRDRGKRPVMGEIAGRFSDLTIVTSDNPRTEEPAAII
AEVLAGIRGTGLREFRPEDAGGTAEKGFTALESRRAAIRLAVQTARPGDIVLLAGKGHED
YQIIGTVKHHFDDREEAAAALRDRD
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagactggatgaactggcacaggtcatacgacccacggcaacaggtggggatttggcg
cgggagatcgaggggctctgctacgattcacggcaggtaaagcccggcggtctctttttc
gctttaagggggggcgccacggacggccacgacttcatccccgcagcccgtgagcggggc
gcggccgccttcgtgcttgaagaaccgtcgcgggcgccggaagggatgacatggcttcgg
gtcgacgatgcccgcctcgccatgtcccgtgccgccgccgccttctacggcaatccgacc
ggcggcgtaccggtgatcggcatcaccggcaccaacggcaagaccaccacgacctatctc
gtggaggcgatcctggcccaagccggcatttcgtccgcggtgctcgggaccataagctac
cggttcggggcgcgggtcatccccgctccccacaccactcccgagtcggtggacctgcag
cggaccatccgcgagctcgttgacctgggggccgctggggtggtgatggaggtctcctcc
cacgccctcgaacagcaccgggtcgacggctgccggtttgacgtcgggatcttcacgaac
ctgacgcgggaccatctcgactatcatcacgacatggagagctacttcgggagcaaggcg
cggctcttcaccgaactcctggcggccgatgccggcaagccccggcgcgcggcggtcatc
aatatcgacgatccctacggtcttcgccttgccgccgttgccgcagcgccggtgatcagt
tacggcctctccgccggggcggcagtgcgggcggaggaggtcagcttcacagtggatggt
gtcgccggctccctggtgacgccggccgggacgcaccccttccggtcgcggctgctcggc
cggttcaatctctacaatattctcgctgccgcggcggcgggtgtcgccctcgacatcccc
ctcgcggccatcgcggcggccatcggtgggaacatcagcgtcccggggcgtctggaacgg
gtcgagaacgaccggggggtgacggtgctggtggactacgcccataccggcgacgccctc
gagaatgttctggaaactgtggcggagattgcgacggggcggatcatcacggtcttcggc
tgcggcggcgaccgcgaccgggggaagcggccggtgatgggagagatcgccgggcgtttc
agcgatctgacgatcgtcacctccgataaccctcgcaccgaggagccggcggcgatcatc
gcggaggtcctcgcggggatccggggaacggggctgcgggagtttcgtccggaagatgcc
ggcggcactgcggaaaaggggtttacggccctggagtcgcgccgtgccgccatccggctc
gccgtccagacggcccgccctggagacattgtgctgctggcggggaaggggcacgaggat
taccagatcatcgggaccgtgaaacaccatttcgacgaccgcgaagaggcggctgccgcc
ctgcgggatcgggactag
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