Geomonas paludis: M1B72_01565
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Entry
M1B72_01565 CDS
T08160
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K22466
5-hydroxybenzimidazole synthase [EC:
4.1.99.23
]
Organism
gpl
Geomonas paludis
Pathway
gpl00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
M1B72_01565 (thiC)
Enzymes [BR:
gpl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.23 5-hydroxybenzimidazole synthase
M1B72_01565 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
DUF4368
Motif
Other DBs
NCBI-ProteinID:
UPU36421
LinkDB
All DBs
Position
346708..348015
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AA seq
435 aa
AA seq
DB search
MKTQIEAARAGIITPQMTQVAFDEQLTPEYVRDKVAAGQIVIPWNHVRKPKVAGIGTGLR
TKVNASIGTSSDIIDYEAEVRKAKVAQEAGADTLMELSVGGDLDRVRREVIAAVDLPVGN
VPLYQAFCEAARKYGDPNKLDEEMLFDIIERQCADGMAFMAVHCGINLYTLERLRKQGYR
YGGLVSKGGVSMAAWMIANNRENPLYEKFDRVVEILKRYDTVLSLGNGLRAGAIHDSSDR
AQIQELLINCELAELGRDMGCQMLVEGPGHVPLDEVEGNIKLQKRMSGGAPYYMLGPIST
DVAPGFDHITAAIGAAQSSRYGADLICYITPAEHLALPNEEDVKMGVKAAKIAAYIGDMN
KYPERGRERDKEMSKARRDLDWQRQFELALFPEDAAAIRKSRVPEDEQTCTMCGDFCASR
GAGKIFAADLRGDKI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcagattgaagcagcgcgcgcggggatcatcaccccgcagatgacgcaagtg
gcattcgacgagcagttaacgccggagtacgtccgggacaaggtggctgcggggcagatc
gtcatcccctggaaccacgtcaggaaaccaaaggtggccggtatcggcaccgggctgcgc
accaaggtgaacgcatccatcggcacctcgtcggacatcatcgattacgaggccgaggtg
cgcaaggcaaaggtggcgcaggaagcgggcgccgataccctgatggagctttccgtgggc
ggcgacctggaccgggtgcggcgcgaggtgatcgccgcggtggacctgccggtgggcaac
gtgccgctgtaccaggccttctgcgaggcggcgaggaagtacggcgaccccaacaagctg
gacgaggagatgctcttcgacatcatcgagcgccagtgcgccgacggcatggccttcatg
gccgtgcattgcggcatcaacctctacaccctggagcgcctgcgcaagcaggggtaccgc
tacggcggcctggtctccaagggtggcgtcagcatggcggcctggatgatcgccaacaac
cgcgagaacccgctttacgagaagttcgaccgcgtggtggagatcctgaagcgctacgac
accgtgctctcgctcggtaacggcctccgggccggcgccatccacgactccagcgaccgc
gcccaaatccaggagctgctgatcaactgcgagctggccgagctcggccgcgacatggga
tgccagatgctggtggaaggtccgggccacgtgccgctggacgaggtcgaggggaacatc
aagctgcagaagaggatgagcggcggcgccccttattatatgctcgggcccatctccacc
gacgtggcgcccgggttcgaccacatcaccgccgccatcggcgccgcccagtcctcccgc
tatggcgccgacctgatctgctacatcaccccggccgagcacctggcgcttcccaacgag
gaggatgtcaagatgggggtcaaggctgccaagatcgccgcctacatcggcgacatgaac
aagtaccccgagcggggcagggagcgcgacaaggagatgagcaaggcgcgccgggacctc
gactggcagcgccagttcgaactggccctgtttcccgaggacgccgccgccatcaggaag
agccgcgtccccgaggacgagcagacctgcaccatgtgcggcgacttctgcgcctcccgc
ggcgccggcaagatcttcgccgccgacctgcgcggggacaagatttga
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