Geomonas paludis: M1B72_09820
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Entry
M1B72_09820 CDS
T08160
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gpl
Geomonas paludis
Pathway
gpl01501
beta-Lactam resistance
gpl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M1B72_09820
01503 Cationic antimicrobial peptide (CAMP) resistance
M1B72_09820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gpl03036
]
M1B72_09820
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpl02000
]
M1B72_09820
01504 Antimicrobial resistance genes [BR:
gpl01504
]
M1B72_09820
Chromosome and associated proteins [BR:
gpl03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
M1B72_09820
Transporters [BR:
gpl02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
M1B72_09820
Antimicrobial resistance genes [BR:
gpl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M1B72_09820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
Beta-barrel_RND_2
BSH_CusB
YknX_C
HH_EMRA
HH_AAEA_pHBA
DUF6687
CzcB_C
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
UPU37984
UniProt:
A0A6V8MVA9
LinkDB
All DBs
Position
2285842..2287149
Genome browser
AA seq
435 aa
AA seq
DB search
MQIKYRAQFLSVVVVLSGSLLLSGCGKKQQQAGGPPMGPPEVGVIEVKPERVALTTELPG
RTSPYLIAEVRPQVSGIILKRVFTEGSDVKAGQVLYQIDPATYQAAYASAKAGEARAEAN
VLPAKLKEERFRELVKINAVSKQDYDAAYAALKQAEADVASAKAAVETARINLAYTKVTA
PISGRIGRSTVTDGALVTASQPTALATIQQLSTMYVDVTQSSSDMLKLNRSLATGLLKRD
QAGQARVKLLLEDGTPYPVTGSLKFSDVTVDQSTGSITVRAVFPNPKQTLLPGMFVRAVL
EEGINEAAILIPQRGVTRNAAGQAVVMVVGADNKVEPRPIQVARTVGDAWLVSSGLKGGE
KVILEGLQKARPGTQVKVVPFQSPEGQGGPGAGGPGAGGPQQGAPAAAGQGGQGAAGSKP
AAPGAPAAPAQPQKK
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaagtacagggcacagtttttatccgtcgtcgtagttctgagcggctccctg
cttctttccgggtgcggcaagaaacagcagcaggccggcggcccgcccatggggcccccc
gaggtgggcgtcatcgaggtgaagcccgagcgcgtggcactgaccaccgagctcccgggg
cgcacctccccgtatctgatcgccgaggtccgtccccaggtgagcggcatcatcctgaag
cgggtcttcaccgaggggagcgacgtcaaggccggccaggtgctgtaccagatcgacccc
gcgacctaccaggccgcttacgccagcgccaaggccggcgaggcgcgcgccgaggccaac
gtgctccccgccaagctaaaagaggagcgcttccgcgaactggtcaagatcaacgcggtc
agcaagcaggattacgacgccgcctacgccgcgctcaagcaggccgaggccgacgtcgcc
tccgccaaggccgcagtggagacggcgcgcatcaaccttgcctacaccaaggtgaccgcc
cccatctccggccgcatcggccgctccaccgtgaccgacggcgccctggtgaccgcgagc
cagccgaccgcgctggccaccatccagcagctctccaccatgtacgtcgacgtgacccag
tccagctcggacatgctgaagctgaaccgcagcctcgccaccggtcttctgaagcgcgac
caggcgggccaggcccgggtgaagctcctgctcgaggacggcacaccgtacccggtgacc
ggttcgctcaagttctccgacgtgaccgtggaccagagcaccggctccatcaccgtgcgc
gccgtcttcccgaaccccaagcagaccctgctccccggcatgttcgtgcgtgcggtactg
gaagaggggatcaacgaggcggcgatcctgatcccgcagcgcggcgtgacccgcaacgct
gccggccaggccgtcgtcatggtggtgggcgccgacaacaaggtcgagccgaggccgatc
caggtggcccgcaccgtgggtgacgcctggctggtcagctccggcctgaagggaggcgag
aaggtgatcctggaaggtctgcagaaggcgcgtcccggcacccaggtgaaggtggtgccg
ttccagtcccccgaagggcagggtggtcccggcgcgggtggccccggcgcgggtggcccg
cagcagggcgctccggcagccgcagggcagggcggccagggcgccgcaggcagcaaaccg
gcagcccccggtgccccggcagccccggcacagccccagaagaagtag
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