Geomonas paludis: M1B72_19305
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Entry
M1B72_19305 CDS
T08160
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gpl
Geomonas paludis
Pathway
gpl00300
Lysine biosynthesis
gpl00550
Peptidoglycan biosynthesis
gpl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M1B72_19305
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M1B72_19305
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gpl01011
]
M1B72_19305
Enzymes [BR:
gpl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
M1B72_19305
Peptidoglycan biosynthesis and degradation proteins [BR:
gpl01011
]
Precursor biosynthesis
Amino acid ligase
M1B72_19305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UPU35562
UniProt:
A0A6V8MS63
LinkDB
All DBs
Position
complement(4511782..4513296)
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AA seq
504 aa
AA seq
DB search
MELRQLLACVPGAKVTGDEAIEIGALCYDSRQVTPGALFFALRGVKSDGTEFVASAVKGG
AVAIIADRPCAVAGVTCVEVPDARRAMSLMAAVFYGTPTGGVPLVGITGTNGKTTTTYLV
EGIMERAGIPAAVLGTISYRFGDTNIPAPNTTPESVDLQRILRELVDQGAKGAVMEVSSH
SLEQRRADGCIFDVAIFTNLTRDHLDYHLDMESYYQSKLRLFTDLLTPNVHKPLRRAVVN
LDDPYGARIAADAAAPVLTYAVNGPADLSVAEVNFSVHGIRCRLKSPVGEININSDLLGR
FNLYNIMGAVGAGLALGIPKEAIEAGIEGHKKVPGRLERVPNDQGVIVLVDYAHTGDALE
NVLSTIAELKTDRIITLFGCGGDRDKGKRPVMGEIAARYSDLAIITSDNPRTEDPQAILA
DVRAGIPAGMKEYSLEELEAGFREKGFATIESRRTAVRAAILAARPGDIVLLAGKGHEDY
QIVGTEKFHFDDREEAAAALKLRA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaactgagacaacttctggcctgtgtcccgggcgccaaggtaaccggtgacgaagcc
atcgagataggggcgctctgctacgactcgcggcaggtgacgccaggcgcgctcttcttc
gcgttgcgcggggtgaagagcgacggaacagaattcgtggcatccgctgtaaaggggggg
gcggtcgcaattattgcggaccgcccctgcgccgttgccggggttacctgcgtcgaggtg
ccggacgcacgccgcgccatgagcctcatggccgccgtcttctacggcacccccaccggc
ggcgtgccgctggtcggcatcaccggcaccaacggcaagaccaccaccacttacctggtc
gaggggatcatggagcgcgccggcatcccggccgccgtactcggcaccatcagctaccgc
ttcggtgacaccaacatcccggcccccaacacgacgccggagtccgtcgacctgcagcgc
atcctgcgggaactggtggaccagggggcgaagggcgcggtgatggaagtctcctcgcac
tccctggagcagcgccgtgccgacggctgcatcttcgacgtggccatcttcaccaacctg
acccgcgaccacctcgactaccacctggacatggagtcctactaccagagcaagctccgg
ctcttcaccgaccttttgacccccaacgtgcacaagccgctgcggcgcgcggtggtcaac
ctggacgacccgtacggggcgaggatcgccgccgatgccgctgcgccggtgctgacctac
gccgtcaacggcccggcagacctgagcgtcgccgaggtgaacttctcggtgcacggcatc
cgctgccgcctgaagtcgccggtgggggagatcaacatcaactcggaccttttggggcgc
ttcaacctgtacaacatcatgggcgccgtgggagcggggcttgccctgggcatccccaag
gaagccatcgaggccggcatcgaggggcacaagaaggtgccgggtcgcctggagcgggtt
cccaacgaccagggcgtcatcgtgctggtcgactacgcccacaccggcgacgcactggag
aatgtcctctccaccatcgccgaactgaagaccgaccggatcatcaccctcttcggctgc
ggcggcgaccgcgacaaggggaagcgcccggtgatgggagagattgccgcccgctacagc
gacctcgccatcatcacctcggacaacccgcgcaccgaggacccgcaggcgatcctggca
gacgtccgtgccggcatcccggcggggatgaaagagtacagcctggaggagttggaggcc
ggtttccgcgagaaaggctttgccaccatcgagtcccggcgcaccgcggtgcgcgccgcc
atcctggccgcgcgccccggcgacatcgtgctgctggcgggcaagggacacgaggattac
cagatcgtcggtaccgagaaattccacttcgacgacagggaagaggctgccgccgcgctg
aaactcagggcgtaa
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